RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 EIF4E2O60573 245 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 WDPCPO95876 746 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 ADORA3P0DMS8 318 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 SLC15A1P46059 708 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 CHRNEQ04844 493 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 ZNF613Q6PF04 617 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 MAFIPQ8WZ33 124 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 RNF31Q96EP0 1072 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 TEX37Q96LM6 180 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 AMBNQ9NP70 447 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 TNFRSF12AQ9NP84 129 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 RYDENQ9NUL5 291 aaKnown RBP7.03□□□□□ -1.28
TCF4-216ENST00000562680 MED17Q9NVC6 651 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 DNAJC27Q9NZQ0 273 aa7.03□□□□□ -1.28
TCF4-216ENST00000562680 NPIPA2E9PIF3 369 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 NPIPA3F8WFD2 350 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 ZNF28P17035 718 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 GMFBP60983 142 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 PIN1Q13526 163 aaPredicted RBP7.02□□□□□ -1.28
TCF4-216ENST00000562680 LAPTM4AQ15012 233 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 GPR19Q15760 415 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 ZNF676Q8N7Q3 588 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 OR51A7Q8NH64 312 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 OIT3Q8WWZ8 545 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 RNF215Q9Y6U7 377 aa7.02□□□□□ -1.28
TCF4-216ENST00000562680 FXYD1O00168 92 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 FAUP35544 74 aaKnown RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 GGT2P36268 569 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 MPLP40238 635 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 OMPP47874 163 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 TSPAN31Q12999 210 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 DNASE1L3Q13609 305 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 RAET1LQ5VY80 246 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 Q7L0L9 218 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 GALNT10Q86SR1 603 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 COMMD7Q86VX2 200 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ACBD7Q8N6N7 88 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 THAP3Q8WTV1 239 aaPredicted RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 FAR1Q8WVX9 515 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 C12orf43Q96C57 262 aaKnown RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 SENP5Q96HI0 755 aaPredicted RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 LOXL4Q96JB6 756 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ADOQ96SZ5 270 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ANKRA2Q9H9E1 313 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 TCF7L1Q9HCS4 588 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 DHCR7Q9UBM7 475 aaKnown RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 BOKQ9UMX3 212 aaPredicted RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 SNX11Q9Y5W9 270 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 PNPP00491 289 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 PLATP00750 562 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 PRKCAP17252 672 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ERVK-25P63136 954 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ZXDAP98168 799 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 TIAL1Q01085 375 aaKnown RBP eCLIP7.02□□□□□ -1.29
TCF4-216ENST00000562680 ST3GAL4Q11206 333 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 DDI2Q5TDH0 399 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 NKAIN2Q5VXU1 208 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 PRSS48Q7RTY5 328 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 UXS1Q8NBZ7 420 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ZNF675Q8TD23 568 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 TFAP2CQ92754 450 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ERVK-18Q9QC07 812 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 PCDHGB6Q9Y5F9 930 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 PDCD11Q14690 1871 aaKnown RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 WASHC1A8K0Z3 465 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ENTPD6O75354 484 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 CH25HO95992 272 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 PPICP45877 212 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 NUDT6P53370 316 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 TMBIM6P55061 237 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 MAT1AQ00266 395 aaKnown RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 DTX3Q8N9I9 347 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 CNOT2Q9NZN8 540 aaKnown RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 SCN5AQ14524 2016 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 IGHV1OR21-1A0A087WYE8 117 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 LOC105371267A0A1B0GV96 52 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 LOC110117498-PIK3R3F6TDL0 507 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 SLC1A7O00341 560 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ZNF432O94892 652 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 CD22P20273 847 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 DAP3P51398 398 aaKnown RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 POLR2GP62487 172 aaKnown RBP eCLIP7.02□□□□□ -1.29
TCF4-216ENST00000562680 CSNK2A1P68400 391 aaPredicted RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 C17orf67Q0P5P2 114 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 GAB1Q13480 694 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 PUM1Q14671 1186 aaKnown RBP eCLIP7.02□□□□□ -1.29
TCF4-216ENST00000562680 KIAA0040Q15053 153 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ARHGAP11BQ3KRB8 267 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 MRPL2Q5T653 305 aaKnown RBP7.02□□□□□ -1.29
TCF4-216ENST00000562680 GTF2IRD2BQ6EKJ0 949 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 GTF2IRD2Q86UP8 949 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 SFTPA1Q8IWL2 248 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 ORAI3Q9BRQ5 295 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 MCCC2Q9HCC0 563 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 CYB5R1Q9UHQ9 305 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 POU2F3Q9UKI9 436 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 SLC7A7Q9UM01 511 aa7.02□□□□□ -1.29
TCF4-216ENST00000562680 OIP5O43482 229 aa7.01□□□□□ -1.29
TCF4-216ENST00000562680 GNALP38405 381 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms