RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 NRF1Q16656 503 aa8.83□□□□□ -1
CLK3-208ENST00000562626 GXYLT1Q4G148 440 aa8.83□□□□□ -1
CLK3-208ENST00000562626 LRRC23Q53EV4 343 aaPredicted RBP8.83□□□□□ -1
CLK3-208ENST00000562626 CYBRD1Q53TN4 286 aa8.83□□□□□ -1
CLK3-208ENST00000562626 SLC25A53Q5H9E4 307 aa8.83□□□□□ -1
CLK3-208ENST00000562626 NHSL2Q5HYW2 709 aa8.83□□□□□ -1
CLK3-208ENST00000562626 ARHGAP11AQ6P4F7 1023 aa8.83□□□□□ -1
CLK3-208ENST00000562626 ERICH5Q6P6B1 374 aa8.83□□□□□ -1
CLK3-208ENST00000562626 SEM1Q6ZVN7 128 aa8.83□□□□□ -1
CLK3-208ENST00000562626 VTCN1Q7Z7D3 282 aa8.83□□□□□ -1
CLK3-208ENST00000562626 GGNQ86UU5 652 aa8.83□□□□□ -1
CLK3-208ENST00000562626 CMIPQ8IY22 773 aa8.83□□□□□ -1
CLK3-208ENST00000562626 GTPBP8Q8N3Z3 284 aaPredicted RBP8.83□□□□□ -1
CLK3-208ENST00000562626 PRR7Q8TB68 274 aa8.83□□□□□ -1
CLK3-208ENST00000562626 OIT3Q8WWZ8 545 aa8.83□□□□□ -1
CLK3-208ENST00000562626 FIG4Q92562 907 aa8.83□□□□□ -1
CLK3-208ENST00000562626 ABTB1Q969K4 478 aaPredicted RBP8.83□□□□□ -1
CLK3-208ENST00000562626 DNAJA3Q96EY1 480 aa8.83□□□□□ -1
CLK3-208ENST00000562626 KCTD14Q9BQ13 255 aaPredicted RBP8.83□□□□□ -1
CLK3-208ENST00000562626 PINK1Q9BXM7 581 aa8.83□□□□□ -1
CLK3-208ENST00000562626 PTGES2Q9H7Z7 377 aa8.83□□□□□ -1
CLK3-208ENST00000562626 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.83□□□□□ -1
CLK3-208ENST00000562626 FAM215AQ9Y5M1 114 aa8.83□□□□□ -1
CLK3-208ENST00000562626 UTP20O75691 2785 aaKnown RBP8.83□□□□□ -1
CLK3-208ENST00000562626 SPTBN1Q01082 2364 aaKnown RBP8.82□□□□□ -1
CLK3-208ENST00000562626 A0A087WZY1 265 aa8.82□□□□□ -1
CLK3-208ENST00000562626 C7orf72A4D263 438 aa8.82□□□□□ -1
CLK3-208ENST00000562626 CFAP73A6NFT4 308 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ENO4A6NNW6 628 aa8.82□□□□□ -1
CLK3-208ENST00000562626 THY1P04216 161 aa8.82□□□□□ -1
CLK3-208ENST00000562626 FESP07332 822 aa8.82□□□□□ -1
CLK3-208ENST00000562626 PEPDP12955 493 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ABOP16442 354 aa8.82□□□□□ -1
CLK3-208ENST00000562626 KLK2P20151 261 aa8.82□□□□□ -1
CLK3-208ENST00000562626 CCNA2P20248 432 aa8.82□□□□□ -1
CLK3-208ENST00000562626 PTNP21246 168 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ATP6V1B2P21281 511 aa8.82□□□□□ -1
CLK3-208ENST00000562626 HTR1EP28566 365 aa8.82□□□□□ -1
CLK3-208ENST00000562626 CA7P43166 264 aa8.82□□□□□ -1
CLK3-208ENST00000562626 OR1E2P47887 323 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ZNF41P51814 821 aaPredicted RBP8.82□□□□□ -1
CLK3-208ENST00000562626 DLX5P56178 289 aa8.82□□□□□ -1
CLK3-208ENST00000562626 MS4A2Q01362 244 aa8.82□□□□□ -1
CLK3-208ENST00000562626 SRYQ05066 204 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ELOAQ14241 798 aaKnown RBP8.82□□□□□ -1
CLK3-208ENST00000562626 CTU2Q2VPK5 515 aaKnown RBP8.82□□□□□ -1
CLK3-208ENST00000562626 POMZP3Q6PJE2 187 aa8.82□□□□□ -1
CLK3-208ENST00000562626 C16orf89Q6UX73 402 aa8.82□□□□□ -1
CLK3-208ENST00000562626 PLEKHM3Q6ZWE6 761 aa8.82□□□□□ -1
CLK3-208ENST00000562626 TSEN54Q7Z6J9 526 aaKnown RBP8.82□□□□□ -1
CLK3-208ENST00000562626 PATL1Q86TB9 770 aaKnown RBP8.82□□□□□ -1
CLK3-208ENST00000562626 ATCAYQ86WG3 371 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ADGRG3Q86Y34 549 aa8.82□□□□□ -1
CLK3-208ENST00000562626 SLC30A8Q8IWU4 369 aa8.82□□□□□ -1
CLK3-208ENST00000562626 UBQLNLQ8IYU4 475 aa8.82□□□□□ -1
CLK3-208ENST00000562626 TOR1AIP2Q8NFQ8 470 aa8.82□□□□□ -1
CLK3-208ENST00000562626 OR6T1Q8NGN1 323 aa8.82□□□□□ -1
CLK3-208ENST00000562626 VANGL1Q8TAA9 524 aaPredicted RBP8.82□□□□□ -1
CLK3-208ENST00000562626 SMPDL3BQ92485 455 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ZBTB8AQ96BR9 441 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ZNF845Q96IR2 970 aaPredicted RBP8.82□□□□□ -1
CLK3-208ENST00000562626 ADGRG7Q96K78 797 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ZNF607Q96SK3 696 aa8.82□□□□□ -1
CLK3-208ENST00000562626 TUBA1CQ9BQE3 449 aa8.82□□□□□ -1
CLK3-208ENST00000562626 PRDM14Q9GZV8 571 aa8.82□□□□□ -1
CLK3-208ENST00000562626 COQ10BQ9H8M1 238 aa8.82□□□□□ -1
CLK3-208ENST00000562626 CTPS2Q9NRF8 586 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ACER3Q9NUN7 267 aa8.82□□□□□ -1
CLK3-208ENST00000562626 ERRFI1Q9UJM3 462 aaPredicted RBP8.82□□□□□ -1
CLK3-208ENST00000562626 CAMK2AQ9UQM7 478 aa8.82□□□□□ -1
CLK3-208ENST00000562626 IFT52Q9Y366 437 aa8.82□□□□□ -1
CLK3-208ENST00000562626 SNX13Q9Y5W8 968 aa8.82□□□□□ -1
CLK3-208ENST00000562626 DOPEY1Q5JWR5 2465 aa8.81□□□□□ -1
CLK3-208ENST00000562626 TRGV8A0A0C4DH27 118 aa8.81□□□□□ -1
CLK3-208ENST00000562626 A0A0J9YW62 118 aa8.81□□□□□ -1
CLK3-208ENST00000562626 TMEM72A0PK05 275 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ZC3H12DA2A288 527 aaKnown RBP8.81□□□□□ -1
CLK3-208ENST00000562626 CLEC18AA5D8T8 446 aa8.81□□□□□ -1
CLK3-208ENST00000562626 OR14I1A6ND48 311 aa8.81□□□□□ -1
CLK3-208ENST00000562626 FAAHO00519 579 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ARPC2O15144 300 aa8.81□□□□□ -1
CLK3-208ENST00000562626 SEC14L5O43304 696 aa8.81□□□□□ -1
CLK3-208ENST00000562626 SERPINB7O75635 380 aa8.81□□□□□ -1
CLK3-208ENST00000562626 LYPD3O95274 346 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ACTL6AO96019 429 aa8.81□□□□□ -1
CLK3-208ENST00000562626 SERPINA1P01009 418 aa8.81□□□□□ -1
CLK3-208ENST00000562626 STSP08842 583 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ZNF17P17021 662 aa8.81□□□□□ -1
CLK3-208ENST00000562626 PGCP20142 388 aa8.81□□□□□ -1
CLK3-208ENST00000562626 CHMP24386 653 aa8.81□□□□□ -1
CLK3-208ENST00000562626 TACR3P29371 465 aa8.81□□□□□ -1
CLK3-208ENST00000562626 SFTPDP35247 375 aa8.81□□□□□ -1
CLK3-208ENST00000562626 RGS8P57771 180 aaPredicted RBP8.81□□□□□ -1
CLK3-208ENST00000562626 NCALDP61601 193 aa8.81□□□□□ -1
CLK3-208ENST00000562626 BNIP2Q12982 314 aa8.81□□□□□ -1
CLK3-208ENST00000562626 CDSNQ15517 529 aa8.81□□□□□ -1
CLK3-208ENST00000562626 GLYR1Q49A26 553 aaPredicted RBP8.81□□□□□ -1
CLK3-208ENST00000562626 INTS11Q5TA45 600 aaKnown RBP8.81□□□□□ -1
CLK3-208ENST00000562626 GLYATQ6IB77 296 aa8.81□□□□□ -1
CLK3-208ENST00000562626 ZNF585AQ6P3V2 769 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms