RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CCDC190Q86UF4 302 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 GATAD2AQ86YP4 633 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 TMEM151BQ8IW70 566 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 Q8N9G6 341 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 DRAXINQ8NBI3 349 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 OR51G2Q8NGK0 314 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 TSLPQ969D9 159 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 EFHD2Q96C19 240 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 SENP5Q96HI0 755 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 LMF1Q96S06 567 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 HCAR1Q9BXC0 346 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ERVMER34-1Q9H9K5 563 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 MCCC2Q9HCC0 563 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ABCB10Q9NRK6 738 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 SEMA5BQ9P283 1151 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 DHCR7Q9UBM7 475 aaKnown RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 SLC35A3Q9Y2D2 325 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 HEATR5AQ86XA9 2040 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 IGKV3D-11A0A0A0MRZ8 115 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 CCDC182A6NF36 153 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 RIIAD1A6NNX1 92 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 PRR23D1E9PI22 279 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 CTDSP2O14595 271 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 POLR1CO15160 346 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 AKAP8O43823 692 aaKnown RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 CDRT1O95170 752 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 PPP1R3DO95685 299 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 IL1AP01583 271 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 GIMD1P0DJR0 217 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 PRR23D2P0DMB1 279 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 SLC6A6P31641 620 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 RANBP1P43487 201 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 BCAP31P51572 246 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 GPR143P51810 404 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 GPLD1P80108 840 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 FHL1Q13642 323 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 KLHL26Q53HC5 615 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 PLEKHG7Q6ZR37 379 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 RTL4Q6ZR62 310 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 LYSMD2Q8IV50 215 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ZNF440Q8IYI8 595 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ZNF321PQ8N8H1 164 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ZFP41Q8N8Y5 198 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 SLC37A3Q8NCC5 494 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 DNAJA4Q8WW22 397 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 SPRYD4Q8WW59 207 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 OIT3Q8WWZ8 545 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 KISS1RQ969F8 398 aaPredicted RBP9.02□□□□□ -0.97
SMG1-205ENST00000561947 C1GALT1C1Q96EU7 318 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 SLC41A2Q96JW4 573 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 SLC46A1Q96NT5 459 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 TNFRSF13CQ96RJ3 184 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 UGT2A1Q9Y4X1 527 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 TRIOBPQ9H2D6 2365 aa9.02□□□□□ -0.97
SMG1-205ENST00000561947 ZC3H12DA2A288 527 aaKnown RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 SLC22A31A6NKX4 558 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 A8MUA0 341 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 LRRTM2O43300 516 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 TBX1O43435 398 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 DYRK3O43781 588 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 DCNP07585 359 aaKnown RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 HK1P19367 917 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 PPICP45877 212 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 CRTC2Q53ET0 693 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 SPANXN2Q5MJ10 180 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 ZNF362Q5T0B9 420 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 CD200R1LQ6Q8B3 271 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 ZNF322Q6U7Q0 402 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 B3GLCTQ6Y288 498 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 PRSS42Q7Z5A4 293 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 FAM71CQ8NEG0 241 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 OR4C6Q8NH72 309 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 PTP4A1Q93096 173 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 SLC25A46Q96AG3 418 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 CLIP3Q96DZ5 547 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 CEP19Q96LK0 163 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 KCTD7Q96MP8 289 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 NDC1Q9BTX1 674 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 MED18Q9BUE0 208 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 HOXD1Q9GZZ0 328 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 MKKSQ9NPJ1 570 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 ICAM5Q9UMF0 924 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 CAB39Q9Y376 341 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 A0A087WUJ7 227 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 IQCMA0A1B0GVH7 501 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 TRDV1A0A1B0GX56 115 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 C12orf71A8MTZ7 269 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 A8MU76 341 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 GNB5O14775 395 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 PRKNO60260 465 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 IL33O95760 270 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 MYF5P13349 255 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 FOLR1P15328 257 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 ZNF3P17036 446 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 FBLP22087 321 aaKnown RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 FGF9P31371 208 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 RORAP35398 523 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 ADH7P40394 386 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 COPZ1P61923 177 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms