RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ATP4BP51164 291 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 RGNQ15493 299 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 FAM214BQ7L5A3 538 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 BTLAQ7Z6A9 289 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 FUNDC1Q8IVP5 155 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 LINC01560Q8TB33 94 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 ROBO4Q8WZ75 1007 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 ST8SIA1Q92185 356 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 CNOT9Q92600 299 aaKnown RBP11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 CPNE4Q96A23 557 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 STARD4Q96DR4 205 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 TMEM19Q96HH6 336 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 OR5B2Q96R09 309 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 SIKE1Q9BRV8 207 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 OPN3Q9H1Y3 402 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 JKAMPQ9P055 326 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 PROCRQ9UNN8 238 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZNF232Q9UNY5 417 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 DCHS2Q6V1P9 2916 aa11.63□□□□□ -0.55
CTDSPL2-209ENST00000560620 TEX15Q9BXT5 2789 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 HEATR5AQ86XA9 2040 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 A0A1W2PNR3 127 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 A8MXE2 369 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 MSTNO14793 375 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 ANGPT2O15123 496 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 EFNA2O43921 213 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 BCAS1O75363 584 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 PABPC4LP0CB38 370 aaKnown RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 NID1P14543 1247 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 CCNA2P20248 432 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 CAPN3P20807 821 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 KIR2DL2P43627 348 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 MVDP53602 400 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 SORDQ00796 357 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 LARS2Q15031 903 aaKnown RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 EXOC3L2Q2M3D2 409 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 LIN52Q52LA3 116 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 RPS26P11Q5JNZ5 115 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 PAGE3Q5JUK9 113 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 MRPL2Q5T653 305 aaKnown RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 PLEKHM3Q6ZWE6 761 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 CMIPQ8IY22 773 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 OR52P1PQ8NH57 321 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLC38A5Q8WUX1 472 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 PMM1Q92871 262 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZNF524Q96C55 264 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 DNAJA3Q96EY1 480 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 GMPPAQ96IJ6 420 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 ADGRG7Q96K78 797 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLC39A3Q9BRY0 314 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 TMEM120AQ9BXJ8 343 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 ARMC7Q9H6L4 198 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 C12orf49Q9H741 205 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 EXOSC3Q9NQT5 275 aaKnown RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 ACER3Q9NUN7 267 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 FGFR1OP2Q9NVK5 253 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 NDRG3Q9UGV2 375 aa11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 SPIN1Q9Y657 262 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL2-209ENST00000560620 A0A1W2PP18 115 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 EVPLLA8MZ36 301 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 CASKO14936 926 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 NUDT7P0C024 238 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 TFPTP0C1Z6 253 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 POU2F1P14859 743 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 PPIBP23284 216 aaKnown RBP11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 APOBEC1P41238 236 aaKnown RBP11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 KRTAP10-9P60411 292 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 GUCY1A3Q02108 690 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 FADDQ13158 208 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZNF239Q16600 458 aaKnown RBP11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLC25A53Q5H9E4 307 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 STK32CQ86UX6 486 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 VRK2Q86Y07 508 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZNF610Q8N9Z0 462 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 FAM71CQ8NEG0 241 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 FAM222BQ8WU58 562 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 ABHD3Q8WU67 409 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 MAL2Q969L2 176 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 GPATCH1Q9BRR8 931 aaKnown RBP11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 POLDIP3Q9BY77 421 aaKnown RBP11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 SRXN1Q9BYN0 137 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 MED4Q9NPJ6 270 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 CTPS2Q9NRF8 586 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 GLRX2Q9NS18 164 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 RLIMQ9NVW2 624 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 TMEM45AQ9NWC5 275 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 DNAJB12Q9NXW2 375 aaKnown RBP11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLAMF8Q9P0V8 285 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 LEF1Q9UJU2 399 aaPredicted RBP11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 ITGB1BP2Q9UKP3 347 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 NDUFAF1Q9Y375 327 aa11.61□□□□□ -0.55
CTDSPL2-209ENST00000560620 ABCA12Q86UK0 2595 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 IGHV3-15A0A0B4J1V0 119 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 A0A0G2JPF8 293 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 SH3D21A4FU49 640 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 CFAP73A6NFT4 308 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 HNRNPCL2B2RXH8 293 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 HNRNPCL3B7ZW38 293 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms