RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 PIGUQ9H490 435 aa18.62■□□□□ 0.57
PSEN1-225ENST00000560005 CACYBPQ9HB71 228 aaKnown RBP18.62■□□□□ 0.57
PSEN1-225ENST00000560005 DUSP22Q9NRW4 184 aa18.62■□□□□ 0.57
PSEN1-225ENST00000560005 ZNF639Q9UID6 485 aa18.62■□□□□ 0.57
PSEN1-225ENST00000560005 CFL2Q9Y281 166 aa18.62■□□□□ 0.57
PSEN1-225ENST00000560005 ARID1AO14497 2285 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 A0A1W2PPR1 153 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 EPPINO95925 133 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 HRGP04196 525 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 BCHEP06276 602 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 ZNF136P52737 540 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 HPCAP84074 193 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 TRMT12Q53H54 448 aaKnown RBP18.61■□□□□ 0.57
PSEN1-225ENST00000560005 OGFRL1Q5TC84 451 aaPredicted RBP18.61■□□□□ 0.57
PSEN1-225ENST00000560005 ENPP6Q6UWR7 440 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 RNF111Q6ZNA4 994 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 C16orf62Q7Z3J2 963 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 ARMC8Q8IUR7 673 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 ANKFN1Q8N957 763 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 OR8K3Q8NH51 312 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 OR14A16Q8NHC5 309 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 LRTOMTQ8WZ04 291 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 SERHL2Q9H4I8 314 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 ZFP64Q9NPA5 681 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 DNAJB9Q9UBS3 223 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 PRODH2Q9UF12 536 aa18.61■□□□□ 0.57
PSEN1-225ENST00000560005 CNOT11Q9UKZ1 510 aaKnown RBP18.61■□□□□ 0.57
PSEN1-225ENST00000560005 SMAD7O15105 426 aaKnown RBP18.6■□□□□ 0.57
PSEN1-225ENST00000560005 CLOCKO15516 846 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 GOSR1O95249 250 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 ITGA2P17301 1181 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 TIMP3P35625 211 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 AGFG1P52594 562 aaKnown RBP18.6■□□□□ 0.57
PSEN1-225ENST00000560005 SORDQ00796 357 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 FUT7Q11130 342 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 PRAMEF20Q5VT98 475 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 HEPHL1Q6MZM0 1159 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 PIWIL3Q7Z3Z3 882 aaKnown RBP18.6■□□□□ 0.57
PSEN1-225ENST00000560005 LACC1Q8IV20 430 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 P3H2Q8IVL5 708 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 LILRA2Q8N149 483 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 OR5L2Q8NGL0 311 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 SLC2A12Q8TD20 617 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 C16orf58Q96GQ5 468 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 ACKR4Q9NPB9 350 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 IL1RAPQ9NPH3 570 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 EQTNQ9NQ60 294 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 POLE3Q9NRF9 147 aa18.6■□□□□ 0.57
PSEN1-225ENST00000560005 BOKQ9UMX3 212 aaPredicted RBP18.6■□□□□ 0.57
PSEN1-225ENST00000560005 MXRA5Q9NR99 2828 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 KIAA1549Q9HCM3 1950 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 LRRC3CA6NJW4 275 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 AHRRA9YTQ3 701 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 C17orf105B2RV13 164 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 EEF1E1-BLOC1S5C9J1V9 151 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 INAFM1C9JVW0 142 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 EEF1E1O43324 174 aaKnown RBP18.59■□□□□ 0.57
PSEN1-225ENST00000560005 IL2RAP01589 272 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 GUSBP08236 651 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 PPP2R2BQ00005 443 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 ZNF267Q14586 743 aaPredicted RBP18.59■□□□□ 0.57
PSEN1-225ENST00000560005 ARHGAP11BQ3KRB8 267 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 GPAT3Q53EU6 434 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 IFI44LQ53G44 452 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 SLC22A10Q63ZE4 541 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 ZDHHC21Q8IVQ6 265 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 SLC44A2Q8IWA5 706 aaPredicted RBP18.59■□□□□ 0.57
PSEN1-225ENST00000560005 OR5D16Q8NGK9 328 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 NRG4Q8WWG1 115 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 EME1Q96AY2 570 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 TPD52L3Q96J77 140 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 HSH2DQ96JZ2 352 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 C9orf16Q9BUW7 83 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 SH2D2AQ9NP31 389 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 V9GYQ6 96 aa18.59■□□□□ 0.57
PSEN1-225ENST00000560005 ANK3Q12955 4377 aaKnown RBP18.58■□□□□ 0.57
PSEN1-225ENST00000560005 H0YJX3 145 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 GNGT2O14610 69 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 GCM2O75603 506 aaPredicted RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 FABP3P05413 133 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 AQP1P29972 269 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 MAGEA2P43356 314 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 ZNF791Q3KP31 576 aaPredicted RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 GRAMD1BQ3KR37 738 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 EXOSC6Q5RKV6 272 aaKnown RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 PACRGLQ8N7B6 248 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 SIMC1Q8NDZ2 872 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 GEMIN6Q8WXD5 167 aaKnown RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 SLC9A6Q92581 669 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 HOXB13Q92826 284 aaPredicted RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 SLC35A4Q96G79 324 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 Q96MF0 132 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 JSRP1Q96MG2 331 aaPredicted RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 ZNF347Q96SE7 839 aa18.58■□□□□ 0.56
PSEN1-225ENST00000560005 LMF2Q9BU23 707 aaKnown RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 MTHFD2LQ9H903 347 aaPredicted RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 GPC6Q9Y625 555 aaPredicted RBP18.58■□□□□ 0.56
PSEN1-225ENST00000560005 TPST1O60507 370 aa18.57■□□□□ 0.56
PSEN1-225ENST00000560005 CBX7O95931 251 aa18.57■□□□□ 0.56
PSEN1-225ENST00000560005 CST1P01037 141 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms