RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 RGNQ15493 299 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 HSP90B2PQ58FF3 399 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 SLC25A53Q5H9E4 307 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 LRIF1Q5T3J3 769 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 MRPL2Q5T653 305 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 ZNF836Q6ZNA1 936 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 PLEKHM3Q6ZWE6 761 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 ARFGAP2Q8N6H7 521 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 LURAP1Q96LR2 239 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 COQ10BQ9H8M1 238 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 MTHFD2LQ9H903 347 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 ACER3Q9NUN7 267 aa13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 DNAJB12Q9NXW2 375 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-211ENST00000559850 TRBV5-3A0A0A0MS03 114 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 A0A1W2PP18 115 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 DNAJA2O60884 412 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 DBIP07108 87 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 GKN3PP0CG01 181 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 IL7RP16871 459 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 IDH2P48735 452 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 TXNL4AP83876 142 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 SELENBP1Q13228 472 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 AP1ARQ63HQ0 302 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 RETREG3Q86VR2 466 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 ZNF610Q8N9Z0 462 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 OR52P1PQ8NH57 321 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 ST8SIA1Q92185 356 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 C14orf79Q96F83 325 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 LRRC46Q96FV0 321 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 OR5B2Q96R09 309 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 CTPS2Q9NRF8 586 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 KCNN3Q9UGI6 736 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 MCTS1Q9ULC4 181 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 DSPPQ9NZW4 1301 aa13.28□□□□□ -0.28
RABGGTA-211ENST00000559850 A8MXE2 369 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 ETV2O00321 342 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 PLGP00747 810 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 FCGR2AP12318 317 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 SLC7A1P30825 629 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 CRISP3P54108 245 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 FAM27E3Q08E93 113 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 GUSBP1Q15486 140 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 ZNF239Q16600 458 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 PDSS1Q5T2R2 415 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 ZNF474Q6S9Z5 364 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 DLEU7Q6UYE1 221 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 TMEM200AQ86VY9 491 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 PEX5LQ8IYB4 626 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 NFKBIDQ8NI38 313 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 ABHD3Q8WU67 409 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 STON2Q8WXE9 905 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 TMEM234Q8WY98 164 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 NRGNQ92686 78 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 SIKE1Q9BRV8 207 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 PIGMQ9H3S5 423 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 MCCC2Q9HCC0 563 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 TRIM33Q9UPN9 1127 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 ZNF443Q9Y2A4 671 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 CHST2Q9Y4C5 530 aa13.27□□□□□ -0.29
RABGGTA-211ENST00000559850 PDZD2O15018 2839 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 LRBAP50851 2863 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 GJE1A6NN92 205 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 FRS3O43559 492 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 CGAP01215 116 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 CRHP06850 196 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 TROVE2P10155 538 aaKnown RBP eCLIP13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 TFPIP10646 304 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 NID1P14543 1247 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 ENPP1P22413 925 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 MAGEA8P43361 318 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 ARFIP2P53365 341 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 CTBP2P56545 445 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 EEF1A1P68104 462 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 SELPLGQ14242 412 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 EXOC3L2Q2M3D2 409 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 GCNT6Q5T4J0 391 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 FAM214BQ7L5A3 538 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 DHDDSQ86SQ9 333 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 CLIP4Q8N3C7 705 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 OIT3Q8WWZ8 545 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 CPPED1Q9BRF8 314 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 CCDC106Q9BWC9 280 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 RSPO3Q9BXY4 272 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 OR11A1Q9GZK7 315 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 RAD21L1Q9H4I0 556 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 RABEP2Q9H5N1 569 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 C12orf49Q9H741 205 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 A4GALTQ9NPC4 353 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 MED4Q9NPJ6 270 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 EXOSC3Q9NQT5 275 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 PAQR5Q9NXK6 330 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 CALML5Q9NZT1 146 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 LEF1Q9UJU2 399 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 PROCRQ9UNN8 238 aa13.26□□□□□ -0.29
RABGGTA-211ENST00000559850 A0A0G2JPF8 293 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 CDHR4A6H8M9 788 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 CFAP73A6NFT4 308 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 TUBAL3A6NHL2 446 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 HNRNPCL2B2RXH8 293 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms