RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 MED17Q9NVC6 651 aa11.62□□□□□ -0.55
USP3-213ENST00000559711 GPR83Q9NYM4 423 aa11.62□□□□□ -0.55
USP3-213ENST00000559711 SIGLEC7Q9Y286 467 aa11.62□□□□□ -0.55
USP3-213ENST00000559711 PCDHGA1Q9Y5H4 931 aa11.62□□□□□ -0.55
USP3-213ENST00000559711 KMT2EQ8IZD2 1858 aa11.62□□□□□ -0.55
USP3-213ENST00000559711 HTR3EA5X5Y0 456 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 KPNA4O00629 521 aaPredicted RBP11.61□□□□□ -0.55
USP3-213ENST00000559711 INMTO95050 263 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 RCBTB2O95199 551 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 NADKO95544 446 aaPredicted RBP11.61□□□□□ -0.55
USP3-213ENST00000559711 IGF2P01344 180 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 HMGN1P05114 100 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 STSP08842 583 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 CD63P08962 238 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 PNMTP11086 282 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 PTNP21246 168 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 C21orf33P30042 268 aaPredicted RBP11.61□□□□□ -0.55
USP3-213ENST00000559711 GSTT1P30711 240 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 GP2P55259 537 aaKnown RBP11.61□□□□□ -0.55
USP3-213ENST00000559711 ZNF117Q03924 483 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 SPEM2Q0P670 501 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 ST3GAL4Q11206 333 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 IRF3Q14653 427 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 PCOLCEQ15113 449 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 PGGHGQ32M88 737 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 SYT14P1Q58G82 188 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 CLEC12AQ5QGZ9 265 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 UBE2UQ5VVX9 321 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 RAB11FIP2Q7L804 512 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 MARCH3Q86UD3 253 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 OR2T33Q8NG76 320 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 OR2Y1Q8NGV0 311 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 ISOC1Q96CN7 298 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 NMD3Q96D46 503 aaKnown RBP11.61□□□□□ -0.55
USP3-213ENST00000559711 SAMD8Q96LT4 415 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 TAAR9Q96RI9 348 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 DDA1Q9BW61 102 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 TBL1XR1Q9BZK7 514 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 SPRY4Q9C004 299 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 ZNF700Q9H0M5 742 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 OR52D1Q9H346 318 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 UBQLN3Q9H347 655 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 C12orf10Q9HB07 376 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 ZBTB20Q9HC78 741 aaPredicted RBP11.61□□□□□ -0.55
USP3-213ENST00000559711 HHATLQ9HCP6 504 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 DNAJC27Q9NZQ0 273 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 PTRH2Q9Y3E5 179 aaKnown RBP11.61□□□□□ -0.55
USP3-213ENST00000559711 RPL36Q9Y3U8 105 aaKnown RBP11.61□□□□□ -0.55
USP3-213ENST00000559711 COMMD3-BMI1R4GMX3 469 aa11.61□□□□□ -0.55
USP3-213ENST00000559711 TEX51A0A1B0GUA7 166 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 C4orf47A7E2U8 309 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 EFCAB9A8MZ26 197 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 ADAM10O14672 748 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 SURF4O15260 269 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 NDUFB5O43674 189 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 ZNF354AO60765 605 aaPredicted RBP11.6□□□□□ -0.55
USP3-213ENST00000559711 STK17BO94768 372 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 MST1P26927 711 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 EVI2BP34910 448 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 SLC1A3P43003 542 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 FHL1Q13642 323 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 TBCEQ15813 527 aaPredicted RBP11.6□□□□□ -0.55
USP3-213ENST00000559711 CSRP2Q16527 193 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 FAM69BQ5VUD6 431 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 GPR107Q5VW38 600 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 SLC30A6Q6NXT4 461 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 B3GNT6Q6ZMB0 384 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 C16orf47Q6ZP98 133 aaPredicted RBP11.6□□□□□ -0.55
USP3-213ENST00000559711 ATG4DQ86TL0 474 aaPredicted RBP11.6□□□□□ -0.55
USP3-213ENST00000559711 SLC43A2Q8N370 569 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 STX19Q8N4C7 294 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 FANK1Q8TC84 345 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 ELP5Q8TE02 316 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 RNF138Q8WVD3 245 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 FCGR1BQ92637 280 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 LRR1Q96L50 414 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 ZNF582Q96NG8 517 aaPredicted RBP11.6□□□□□ -0.55
USP3-213ENST00000559711 CDCA4Q9BXL8 241 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 ADAM19Q9H013 955 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 PTTG2Q9NZH5 202 aa11.6□□□□□ -0.55
USP3-213ENST00000559711 COL27A1Q8IZC6 1860 aaPredicted RBP11.6□□□□□ -0.55
USP3-213ENST00000559711 IGHV1-45A0A0A0MS14 117 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 A0A1W2PQ72 361 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 TRIM64BA6NI03 449 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 ENO4A6NNW6 628 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 BHLHE40O14503 412 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 HCRTR2O43614 444 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 HCN1O60741 890 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 FADS2O95864 444 aaKnown RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 SAGP10523 405 aaPredicted RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 BMP7P18075 431 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 FUT1P19526 365 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 TMBIM6P55061 237 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 ZNF91Q05481 1191 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 CRYZQ08257 329 aaKnown RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 CCDC157Q569K6 752 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 PLAG1Q6DJT9 500 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 SMARCD3Q6STE5 483 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 BCDIN3DQ7Z5W3 292 aaKnown RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 MISPQ8IVT2 679 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms