RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 ARFGAP2Q8N6H7 521 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 ABHD3Q8WU67 409 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 CKAP2Q8WWK9 683 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 TMEM234Q8WY98 164 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 ST8SIA1Q92185 356 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 CNOT9Q92600 299 aaKnown RBP13.69□□□□□ -0.22
RPL28-207ENST00000558815 DNAJA3Q96EY1 480 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 GMPPAQ96IJ6 420 aaPredicted RBP13.69□□□□□ -0.22
RPL28-207ENST00000558815 MAGEB18Q96M61 343 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 OR5B2Q96R09 309 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 CCDC28BQ9BUN5 200 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 COQ10BQ9H8M1 238 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 TPT1P8Q9HAU6 139 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 RASSF1Q9NS23 344 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 CCDC167Q9P0B6 97 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 P2RX2Q9UBL9 471 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 NDRG3Q9UGV2 375 aa13.69□□□□□ -0.22
RPL28-207ENST00000558815 CASKO14936 926 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 SS18L1O75177 396 aaPredicted RBP13.68□□□□□ -0.22
RPL28-207ENST00000558815 NTN1O95631 604 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 CGAP01215 116 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 GUSBP08236 651 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 TFPIP10646 304 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 CD8BP10966 210 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 IL7RP16871 459 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 CCNA2P20248 432 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 TXNL4AP83876 142 aaKnown RBP13.68□□□□□ -0.22
RPL28-207ENST00000558815 GUSBP1Q15486 140 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 SLC25A53Q5H9E4 307 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 RPS26P11Q5JNZ5 115 aaPredicted RBP13.68□□□□□ -0.22
RPL28-207ENST00000558815 ANKRD34AQ69YU3 496 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 PLEKHM3Q6ZWE6 761 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 ZNF550Q7Z398 422 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 CDC20BQ86Y33 519 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 FAM71CQ8NEG0 241 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 OR6K3Q8NGY3 331 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 GTF2H4Q92759 462 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 CPNE4Q96A23 557 aaPredicted RBP13.68□□□□□ -0.22
RPL28-207ENST00000558815 ZC3HAV1LQ96H79 300 aaKnown RBP13.68□□□□□ -0.22
RPL28-207ENST00000558815 SLC39A3Q9BRY0 314 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 KLHL4Q9C0H6 718 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 LIME1Q9H400 295 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 SERINC1Q9NRX5 453 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 ACER3Q9NUN7 267 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 KLHL28Q9NXS3 571 aa13.68□□□□□ -0.22
RPL28-207ENST00000558815 AP3D1O14617 1153 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 PABPC4LP0CB38 370 aaKnown RBP13.67□□□□□ -0.22
RPL28-207ENST00000558815 ZCCHC18P0CG32 403 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 AGTR1P30556 359 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 DNAJA1P31689 397 aaKnown RBP13.67□□□□□ -0.22
RPL28-207ENST00000558815 CCKARP32238 428 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 IDH2P48735 452 aaKnown RBP13.67□□□□□ -0.22
RPL28-207ENST00000558815 MVDP53602 400 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 PLAURQ03405 335 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 GNA13Q14344 377 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 DAZAP2Q15038 168 aaPredicted RBP13.67□□□□□ -0.22
RPL28-207ENST00000558815 AGKQ53H12 422 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 TMEM201Q5SNT2 666 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 GTF2IRD2BQ6EKJ0 949 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 FCRLAQ7L513 359 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 GTF2IRD2Q86UP8 949 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 VRK2Q86Y07 508 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 PEX5LQ8IYB4 626 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 RNF128Q8TEB7 428 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 OIT3Q8WWZ8 545 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 SPDL1Q96EA4 605 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 DACH2Q96NX9 599 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 PAIP1Q9H074 479 aaKnown RBP13.67□□□□□ -0.22
RPL28-207ENST00000558815 MTHFD2LQ9H903 347 aaPredicted RBP13.67□□□□□ -0.22
RPL28-207ENST00000558815 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
RPL28-207ENST00000558815 MYO9AB2RTY4 2548 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 ANKRD17O75179 2603 aaKnown RBP13.66□□□□□ -0.22
RPL28-207ENST00000558815 POLQO75417 2590 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 TMEM247A6NEH6 219 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 AGAP5A6NIR3 686 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 CLIC1O00299 241 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 DBIP07108 87 aaKnown RBP13.66□□□□□ -0.22
RPL28-207ENST00000558815 NCF2P19878 526 aaPredicted RBP13.66□□□□□ -0.22
RPL28-207ENST00000558815 ENPP1P22413 925 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 UGT2B10P36537 528 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 CRISP3P54108 245 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
RPL28-207ENST00000558815 STK32CQ86UX6 486 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 FUNDC1Q8IVP5 155 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 OR52P1PQ8NH57 321 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 TMEM19Q96HH6 336 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 WFIKKN1Q96NZ8 548 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 CACYBPQ9HB71 228 aaKnown RBP13.66□□□□□ -0.22
RPL28-207ENST00000558815 NPHS2Q9NP85 383 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 EXOSC3Q9NQT5 275 aaKnown RBP13.66□□□□□ -0.22
RPL28-207ENST00000558815 GLRX2Q9NS18 164 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 ELOVL5Q9NYP7 299 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 CALML5Q9NZT1 146 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 C6orf203Q9P0P8 240 aaPredicted RBP13.66□□□□□ -0.22
RPL28-207ENST00000558815 TESMINQ9Y4I5 508 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 PCDHB14Q9Y5E9 798 aa13.66□□□□□ -0.22
RPL28-207ENST00000558815 FAM221AA4D161 298 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms