RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 FAM171A2A8MVW0 826 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 GTPBP1O00178 669 aaKnown RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ADAMDEC1O15204 470 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 CFLARO15519 480 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 TBX1O43435 398 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 SLU7O95391 586 aaKnown RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 SERPINE1P05121 402 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 BPGMP07738 259 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 LINGO3P0C6S8 592 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 VSIG8P0DPA2 414 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 UBL4AP11441 157 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 PSMA4P25789 261 aaKnown RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 AGTR1P30556 359 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ADSLP30566 484 aaPredicted RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 CCR4P51679 360 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 NR1H2P55055 460 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 C21orf58P58505 322 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 NKX6-1P78426 367 aaPredicted RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 SELENBP1Q13228 472 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 RNPS1Q15287 305 aaKnown RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ACKR1Q16570 336 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF239Q16600 458 aaKnown RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 SMU1Q2TAY7 513 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 KRT71Q3SY84 523 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 IL23RQ5VWK5 629 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ANKRD34AQ69YU3 496 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 GTF2IRD2BQ6EKJ0 949 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 GTF2IRD2Q86UP8 949 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 P3H2Q8IVL5 708 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 LILRA2Q8N149 483 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 KRTCAP2Q8N6L1 136 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 TOR1AIP2Q8NFQ8 470 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 OR5AK3PQ8NH89 298 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ZFP90Q8TF47 636 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 AENQ8WTP8 325 aaKnown RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ARL8AQ96BM9 186 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 C16orf58Q96GQ5 468 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 C18orf12Q96KH6 178 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 SLC35G5Q96KT7 338 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 MRGPRX4Q96LA9 322 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 TACO1Q9BSH4 297 aaKnown RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 DUSP26Q9BV47 211 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 OR10A4Q9H209 315 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 CXorf36Q9H7Y0 433 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 PLSCR4Q9NRQ2 329 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 FBXO34Q9NWN3 711 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ASIC5Q9NY37 505 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 KLHL13Q9P2N7 655 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 SF3B6Q9Y3B4 125 aaKnown RBP7.2□□□□□ -1.26
TRAF3-205ENST00000558700 DTNAQ9Y4J8 743 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 ACANP16112 2415 aa7.2□□□□□ -1.26
TRAF3-205ENST00000558700 NPIPA5A0A0B4J1W7 369 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.19□□□□□ -1.26
TRAF3-205ENST00000558700 RNF103-CHMP3A0A140T963 221 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 DUXAA6NLW8 204 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 NPIPA7E9PJI5 369 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 NPIPB9F8W1W9 429 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF264O43296 627 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 TYROBPO43914 113 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 PEX14O75381 377 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 SNUPNO95149 360 aaKnown RBP7.19□□□□□ -1.26
TRAF3-205ENST00000558700 AGR2O95994 175 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 INHBBP09529 407 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 MYZAPP0CAP1 466 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 NPIPA8P0DM63 369 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 G6PDP11413 515 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 PRKCAP17252 672 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 PSMB1P20618 241 aaKnown RBP7.19□□□□□ -1.26
TRAF3-205ENST00000558700 IL11P20809 199 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 SLC7A1P30825 629 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 ARRB2P32121 409 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 ATP12AP54707 1039 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 CARD18P57730 90 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 HBA1P69905 142 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 EMX2Q04743 252 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 PDCD2Q16342 344 aaPredicted RBP7.19□□□□□ -1.26
TRAF3-205ENST00000558700 KLHL26Q53HC5 615 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRAF3-205ENST00000558700 C3orf33Q6P1S2 294 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 WDR93Q6P2C0 686 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 STAC2Q6ZMT1 411 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 KRTAP1-3Q8IUG1 177 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 NUDCD3Q8IVD9 361 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 RIMKLAQ8IXN7 391 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 MREGQ8N565 214 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 POC1BQ8TC44 478 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 ABHD3Q8WU67 409 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 RNF141Q8WVD5 230 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 OSTF1Q92882 214 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 COQ8BQ96D53 544 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 MARK4Q96L34 752 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 C3orf30Q96M34 536 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 OR7D2Q96RA2 312 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 NPAS1Q99742 590 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 TMEM109Q9BVC6 243 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 ACTR6Q9GZN1 396 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 NMUR2Q9GZQ4 415 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 COQ10BQ9H8M1 238 aa7.19□□□□□ -1.26
TRAF3-205ENST00000558700 GPATCH2Q9NW75 528 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms