RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 RAMP1O60894 148 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 SNNO75324 88 aaPredicted RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 FESP07332 822 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 POU6F2P78424 691 aaPredicted RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 TMEM176BQ3YBM2 270 aaPredicted RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 CBLN3Q6UW01 205 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 Q6ZT83 130 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 BHLHA15Q7RTS1 189 aaPredicted RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 MTERF4Q7Z6M4 381 aaKnown RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 FBXO27Q8NI29 283 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 PHOSPHO1Q8TCT1 267 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 ZFP90Q8TF47 636 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 TMEM158Q8WZ71 300 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 PPCDCQ96CD2 204 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 FAM120BQ96EK7 910 aaKnown RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 HS6ST2Q96MM7 605 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 PSD2Q9BQI7 771 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 BTBD2Q9BX70 525 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 NUF2Q9BZD4 464 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 CXorf36Q9H7Y0 433 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 BCO1Q9HAY6 547 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 BARX1Q9HBU1 254 aaPredicted RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 DUSP22Q9NRW4 184 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 SIRT3Q9NTG7 399 aaPredicted RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 CISD1Q9NZ45 108 aaKnown RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 MARCOQ9UEW3 520 aaPredicted RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 PRSS50Q9UI38 385 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 ICAM5Q9UMF0 924 aa9.46□□□□□ -0.9
SHF-203ENST00000558294 GPC6Q9Y625 555 aaPredicted RBP9.46□□□□□ -0.9
SHF-203ENST00000558294 IGHV4-30-2A0A087WSY4 118 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 A0A096LNT2 108 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 IGHV3-15A0A0B4J1V0 119 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 NPIPA5A0A0B4J1W7 369 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 A8MV72 311 aaPredicted RBP9.45□□□□□ -0.9
SHF-203ENST00000558294 NPIPA7E9PJI5 369 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 GPRIN2O60269 458 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 LYZL6O75951 148 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 HMGN2P05204 90 aaKnown RBP9.45□□□□□ -0.9
SHF-203ENST00000558294 NPIPA8P0DM63 369 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 PRKCAP17252 672 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 EFNA1P20827 205 aaPredicted RBP9.45□□□□□ -0.9
SHF-203ENST00000558294 ENPP1P22413 925 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 EDNRAP25101 427 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 ASMTP46597 345 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 OR3A2P47893 321 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 RNF144AP50876 292 aaPredicted RBP9.45□□□□□ -0.9
SHF-203ENST00000558294 P2RX1P51575 399 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 CDH11P55287 796 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 C21orf58P58505 322 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 EMX2Q04743 252 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 MLC1Q15049 377 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 PPA1Q15181 289 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 TOMM34Q15785 309 aaPredicted RBP9.45□□□□□ -0.9
SHF-203ENST00000558294 CHRFAM7AQ494W8 412 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 KLHL26Q53HC5 615 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.45□□□□□ -0.9
SHF-203ENST00000558294 KIRREL3Q8IZU9 778 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 SLC43A2Q8N370 569 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 ATP6V1C2Q8NEY4 427 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 OR7A2PQ8NGA2 310 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 GPR119Q8TDV5 335 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 DYDC1Q8WWB3 177 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 JADE3Q92613 823 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 CDS1Q92903 461 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 ZNF524Q96C55 264 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 STACQ99469 402 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 PIGUQ9H490 435 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 ALG2Q9H553 416 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 FAIMQ9NVQ4 179 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 GIN1Q9NXP7 522 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 NPAP1Q9NZP6 1156 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 KLHL9Q9P2J3 617 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 HAO1Q9UJM8 370 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 B3GALT5Q9Y2C3 310 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 CARD8Q9Y2G2 431 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 FREM1Q5H8C1 2179 aa9.45□□□□□ -0.9
SHF-203ENST00000558294 ABCA1O95477 2261 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 GOLGA8QA0A0J9YX86 632 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 GOLGA8OA6NCC3 632 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 GOLGA8NF8WBI6 632 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 SSX4O60224 188 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 CYTIPO60759 359 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 NUDT14O95848 222 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 G6PDP11413 515 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 COX5AP20674 150 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 IGHV1-2P23083 117 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 SUMO3P55854 103 aaPredicted RBP9.44□□□□□ -0.9
SHF-203ENST00000558294 RAC3P60763 192 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 SELENBP1Q13228 472 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 MAD2L1Q13257 205 aaPredicted RBP9.44□□□□□ -0.9
SHF-203ENST00000558294 LASP1Q14847 261 aaKnown RBP9.44□□□□□ -0.9
SHF-203ENST00000558294 PTGR1Q14914 329 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 STK11Q15831 433 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 NRF1Q16656 503 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 PGS1Q32NB8 556 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 NDUFAF6Q330K2 333 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 TIMM23BQ5SRD1 257 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 C6orf52Q5T4I8 152 aa9.44□□□□□ -0.9
SHF-203ENST00000558294 R3HCC1LQ7Z5L2 792 aaKnown RBP9.44□□□□□ -0.9
SHF-203ENST00000558294 KRTCAP2Q8N6L1 136 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms