RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MREGQ8N565 214 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 ZNF611Q8N823 705 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 OR8J2Q8NGG1 315 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 MIPOL1Q8TD10 442 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TMEM234Q8WY98 164 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 AKAP1Q92667 903 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 QRSL1Q9H0R6 528 aaKnown RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 CENPHQ9H3R5 247 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 SERINC1Q9NRX5 453 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 RNF115Q9Y4L5 304 aa13.01□□□□□ -0.33
SHMT2-235ENST00000557740 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-235ENST00000557740 KIAA0513O60268 411 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 FCMRO60667 390 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 UGT2B17O75795 530 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 H6PDO95479 791 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 LY6G6DO95868 133 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 ADAP00813 363 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 OR12D1P0DN82 309 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 UQCRC2P22695 453 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 CHI3L1P36222 383 aaPredicted RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 SLC1A6P48664 564 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 RPL14P50914 215 aaKnown RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 CLNS1AP54105 237 aaKnown RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 CASP9P55211 416 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 ATP5J2P56134 94 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 SESN3P58005 492 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 RASGEF1BQ0VAM2 473 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 MERTKQ12866 999 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 DPY19L1Q2PZI1 675 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 SFRP5Q5T4F7 317 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 OLIG3Q7RTU3 272 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 CIARTQ8N365 385 aaPredicted RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 SLC25A43Q8WUT9 341 aaPredicted RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 XAGE5Q8WWM1 108 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 OIT3Q8WWZ8 545 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 HSD17B8Q92506 261 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 TESCQ96BS2 214 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 ZNF524Q96C55 264 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 USB1Q9BQ65 265 aaKnown RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 PSD2Q9BQI7 771 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 ESRP2Q9H6T0 727 aaKnown RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 BCO1Q9HAY6 547 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 SSU72Q9NP77 194 aaKnown RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 POLE3Q9NRF9 147 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 KCNE5Q9UJ90 142 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 WDR45Q9Y484 360 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 SPIN1Q9Y657 262 aaPredicted RBP13□□□□□ -0.33
SHMT2-235ENST00000557740 TLN2Q9Y4G6 2542 aa13□□□□□ -0.33
SHMT2-235ENST00000557740 USF3Q68DE3 2245 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 PRSS51A0A1B0GVH4 220 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 ESPNB1AK53 854 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 SMAD9O15198 467 aaKnown RBP12.99□□□□□ -0.33
SHMT2-235ENST00000557740 FESP07332 822 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 CD3EP07766 207 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 TFPIP10646 304 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 LBPP18428 481 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 BGNP21810 368 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 OR3A2P47893 321 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 RPS4XP62701 263 aaKnown RBP12.99□□□□□ -0.33
SHMT2-235ENST00000557740 CSNK2A1P68400 391 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-235ENST00000557740 ITGADQ13349 1161 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 TAB1Q15750 504 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 SYT14P1Q58G82 188 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 SAXO2Q658L1 398 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 HEPHL1Q6MZM0 1159 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 Q6ZT83 130 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 BHLHA15Q7RTS1 189 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-235ENST00000557740 ZNF563Q8TA94 476 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 RAB3IL1Q8TBN0 382 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 IGFBPL1Q8WX77 278 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 RAB8BQ92930 207 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 SORT1Q99523 831 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 NUF2Q9BZD4 464 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 ACER3Q9NUN7 267 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 EMC3Q9P0I2 261 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 SLC35A3Q9Y2D2 325 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 DSCAMO60469 2012 aa12.99□□□□□ -0.33
SHMT2-235ENST00000557740 VPS13CQ709C8 3753 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 HIVEP2P31629 2446 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 FN1P02751 2386 aaKnown RBP12.98□□□□□ -0.33
SHMT2-235ENST00000557740 CSPG4Q6UVK1 2322 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 ZNF724A8MTY0 619 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 E9PBE3 544 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 SULT2B1O00204 365 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 ANKRD28O15084 1053 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 CYTIPO60759 359 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 DNAJA2O60884 412 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 CNOT4O95628 575 aaKnown RBP12.98□□□□□ -0.33
SHMT2-235ENST00000557740 DHRS4L1P0CG22 281 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 PAX1P15863 534 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 S100A3P33764 101 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 RYKP34925 604 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 DIO1P49895 249 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 STX3Q13277 289 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 STK11Q15831 433 aa12.98□□□□□ -0.33
SHMT2-235ENST00000557740 FAM174BQ3ZCQ3 159 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms