RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 LGI1O95970 557 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 HSD17B1P14061 328 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 HTR1EP28566 365 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 KCNJ5P48544 419 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 CCR4P51679 360 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 SLC7A2P52569 658 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 CLDN18P56856 261 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 SESN3P58005 492 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 LIPEQ05469 1076 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 RPS26P11Q5JNZ5 115 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-234ENST00000557703 SAMD4BQ5PRF9 694 aaKnown RBP12.36□□□□□ -0.43
SHMT2-234ENST00000557703 C1orf185Q5T7R7 199 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 WBP2NLQ6ICG8 309 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 C3orf33Q6P1S2 294 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 C5orf46Q6UWT4 87 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 VRK2Q86Y07 508 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 DNAJA4Q8WW22 397 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-234ENST00000557703 LZICQ8WZA0 190 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 WNT2BQ93097 391 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 DMRTA2Q96SC8 542 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 TM9SF2Q99805 663 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 TRIM2Q9C040 744 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 POLR2J2Q9GZM3 115 aaKnown RBP12.36□□□□□ -0.43
SHMT2-234ENST00000557703 ADAM19Q9H013 955 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 POLR2J3Q9H1A7 115 aaKnown RBP12.36□□□□□ -0.43
SHMT2-234ENST00000557703 PNPLA3Q9NST1 481 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 ARL8BQ9NVJ2 186 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 TESQ9UGI8 421 aaKnown RBP12.36□□□□□ -0.43
SHMT2-234ENST00000557703 TINAGQ9UJW2 476 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF175Q9Y473 711 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 HRH3Q9Y5N1 445 aa12.36□□□□□ -0.43
SHMT2-234ENST00000557703 PHF3Q92576 2039 aaKnown RBP12.36□□□□□ -0.43
SHMT2-234ENST00000557703 SPTAN1Q13813 2472 aaKnown RBP12.35□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF208O43345 1280 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 ATP5HO75947 161 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 AGFG2O95081 481 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 CRHP06850 196 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 FCGR2AP12318 317 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 KDELR2P33947 212 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 ACAA2P42765 397 aaKnown RBP12.35□□□□□ -0.43
SHMT2-234ENST00000557703 IDH2P48735 452 aaKnown RBP12.35□□□□□ -0.43
SHMT2-234ENST00000557703 RASSF2P50749 326 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 POLR2HP52434 150 aaKnown RBP12.35□□□□□ -0.43
SHMT2-234ENST00000557703 SWT1Q5T5J6 900 aaKnown RBP12.35□□□□□ -0.43
SHMT2-234ENST00000557703 RIPPLY2Q5TAB7 128 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 GTF2IRD2BQ6EKJ0 949 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 OR2A2Q6IF42 318 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF585AQ6P3V2 769 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 OLIG3Q7RTU3 272 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 GTF2IRD2Q86UP8 949 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 RANBP3LQ86VV4 465 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-234ENST00000557703 CLIP4Q8N3C7 705 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 FBXO27Q8NI29 283 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 ASB5Q8WWX0 329 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 RND1Q92730 232 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 KCTD14Q9BQ13 255 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF559Q9BR84 538 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 RLIMQ9NVW2 624 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 COQ3Q9NZJ6 369 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 ERRFI1Q9UJM3 462 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-234ENST00000557703 CAMK2AQ9UQM7 478 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 SLC9A8Q9Y2E8 581 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 HDGFL3Q9Y3E1 203 aa12.35□□□□□ -0.43
SHMT2-234ENST00000557703 CLDN24A6NM45 220 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 HSPB2A8KAH6 182 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 B2RBV5 119 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 H0Y3Z8 333 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 NME4O00746 187 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 GSTA4O15217 222 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 OIP5O43482 229 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 DNPH1O43598 174 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 IL2RAP01589 272 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 RYKP34925 604 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 NCALDP61601 193 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 SELENOWP63302 87 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 MXRA7P84157 204 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 PLAURQ03405 335 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 MERTKQ12866 999 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 HSPB2Q16082 182 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 FXNQ16595 210 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 ACSF3Q4G176 576 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-234ENST00000557703 C1QL3Q5VWW1 255 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 PLEKHM3Q6ZWE6 761 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 FJX1Q86VR8 437 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 LILRA2Q8N149 483 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 ZNF808Q8N4W9 903 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-234ENST00000557703 OR52E4Q8NGH9 312 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 OR5M9Q8NGP3 310 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 POC1BQ8TC44 478 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 SSC4DQ8WTU2 575 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 PROX1Q92786 737 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 TTYH2Q9BSA4 534 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 MUC13Q9H3R2 512 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 GP6Q9HCN6 339 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 GLRX2Q9NS18 164 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 ADPRHL2Q9NX46 363 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 CHRNA9Q9UGM1 479 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 CHST2Q9Y4C5 530 aa12.34□□□□□ -0.43
SHMT2-234ENST00000557703 MBD3L4A6NDZ8 208 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 MBD3L3A6NE82 208 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms