RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RBCK1Q9BYM8 510 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 ZCCHC4Q9H5U6 513 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 SLC6A20Q9NP91 592 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 C20orf141Q9NUB4 165 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 CLDND1Q9NY35 253 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 AKAP7Q9P0M2 348 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 SLC27A6Q9Y2P4 619 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 A0A1W2PPL8 197 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 KHNYNO15037 678 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 SNRNP200O75643 2136 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 TOXO94900 526 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 TGM6O95932 706 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 ASGR2P07307 311 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 SELENOPP49908 381 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 DBPQ10586 325 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 KRT33BQ14525 404 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 OR1Q1Q15612 314 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 GPR68Q15743 365 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 TCEAL5Q5H9L2 206 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 TJAP1Q5JTD0 557 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 THSD4Q6ZMP0 1018 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 WDR88Q6ZMY6 472 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 PRSS45Q7RTY3 260 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 UXS1Q8NBZ7 420 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 FAM98AQ8NCA5 519 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 OR7G2Q8NG99 324 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 OR4C6Q8NH72 309 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 THAP4Q8WY91 577 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 RBPMSQ93062 196 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 SMAD5Q99717 465 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 C6orf106Q9H6K1 298 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 RDH8Q9NYR8 311 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 COQ3Q9NZJ6 369 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 ST6GALNAC2Q9UJ37 374 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 DENND4AQ7Z401 1863 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 A0A1W2PPK0 400 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 PRRT4C9JH25 899 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF3P17036 446 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 SLC2A5P22732 501 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 HTR2AP28223 471 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 NOS3P29474 1203 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 BMP8BP34820 402 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 TSPAN5P62079 268 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 RPL6Q02878 288 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 POU4F2Q12837 409 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 BAMBIQ13145 260 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 COL9A2Q14055 689 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 UBE2NLQ5JXB2 153 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 FCRLBQ6BAA4 426 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 FAAH2Q6GMR7 532 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 TMPRSS11FQ6ZWK6 438 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 MTSS1LQ765P7 747 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 BMP8AQ7Z5Y6 402 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 GPAT4Q86UL3 456 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 LRRC25Q8N386 305 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 OR13C2Q8NGS9 318 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 POF1BQ8WVV4 589 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 COL26A1Q96A83 441 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 BPIFA2Q96DR5 249 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 CMTM3Q96MX0 182 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 MFRPQ9BY79 579 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 WDR26Q9H7D7 661 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 AUNIPQ9H7T9 357 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 HAO2Q9NYQ3 351 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 APOBEC3BQ9UH17 382 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 KIF25Q9UIL4 384 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 PPIEQ9UNP9 301 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 TRPM6Q9BX84 2022 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 TBC1D3EA0A087X179 549 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 ABHD14A-ACY1A0A1B0GW23 586 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 G3V3Q6 166 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 BET1O15155 118 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 ECDO95905 644 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 CLUP10909 449 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 IL9P15248 144 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 NT5EP21589 574 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 SDHBP21912 280 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 P2RY2P41231 377 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 CCR9P51686 369 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 BTN3A2P78410 334 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 CRMP1Q14194 572 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 METTL11BQ5VVY1 283 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 SFRP4Q6FHJ7 346 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 MTFR2Q6P444 385 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 OVCH1Q7RTY7 1134 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 PRSS42Q7Z5A4 293 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 SYT9Q86SS6 491 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 SLAIN1Q8ND83 568 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 OR2T4Q8NH00 348 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 SMAP2Q8WU79 429 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 SDF2Q99470 211 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 CDCP1Q9H5V8 836 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 OR6C2Q9NZP2 312 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 NTMQ9P121 344 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 POMT2Q9UKY4 750 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 BAIAP2Q9UQB8 552 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 SIGLEC7Q9Y286 467 aa10.94□□□□□ -0.66
VIPAS39-211ENST00000557658 CENPVL1A0A0U1RR11 272 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 NAP1L6A6NFF2 107 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 OGG1O15527 345 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms