RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TMEM44Q2T9K0 475 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 TMEM249Q2WGJ8 235 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SGO1Q5FBB7 561 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 NCMAPQ5T1S8 102 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 LGSNQ5TDP6 509 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SLC44A2Q8IWA5 706 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 LRRC8AQ8IWT6 810 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 CTAGE3PQ8IX95 158 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SLC35F6Q8N357 371 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 OR9A2Q8NGT5 310 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 OR10D3Q8NH80 312 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 RHEBL1Q8TAI7 183 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 MIPOL1Q8TD10 442 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF675Q8TD23 568 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 TRPC4APQ8TEL6 797 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 PYROXD1Q8WU10 500 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 TM4SF18Q96CE8 201 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 NMD3Q96D46 503 aaKnown RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 RNF125Q96EQ8 232 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 C11orf24Q96F05 449 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 NEIL1Q96FI4 390 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 PRPF18Q99633 342 aaKnown RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 TRAF4Q9BUZ4 470 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 PRRG4Q9BZD6 226 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 TRIM2Q9C040 744 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 AMBRA1Q9C0C7 1298 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 RABEP2Q9H5N1 569 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 NOL11Q9H8H0 719 aaKnown RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 LRTM1Q9HBL6 345 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 BARX1Q9HBU1 254 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 PFDN4Q9NQP4 134 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 FARSBQ9NSD9 589 aaKnown RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 AHSPQ9NZD4 102 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-207ENST00000557470 UTS2RQ9UKP6 389 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 PSME2Q9UL46 239 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SNX12Q9UMY4 172 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 SLC12A4Q9UP95 1085 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 OR10H1Q9Y4A9 318 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 AP4B1Q9Y6B7 739 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF780BQ9Y6R6 833 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 ALPK2Q86TB3 2170 aa5.2□□□□□ -1.58
VPS33B-207ENST00000557470 PAX4O43316 350 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 CXCL13O43927 109 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 GMFGO60234 142 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 RAMP1O60894 148 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 BCAS2O75934 225 aaPredicted RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 SLU7O95391 586 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 NTN1O95631 604 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 MT-ND5P03915 603 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 OPN1LWP04000 364 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 TK1P04183 234 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 QDPRP09417 244 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 PTNP21246 168 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 AGTR1P30556 359 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 ALDH3A2P51648 485 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 CCNG1P51959 295 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 NUDT6P53370 316 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 PRKAA2P54646 552 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 C21orf58P58505 322 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 RPS16P62249 146 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 PSPHP78330 225 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 MRPS22P82650 360 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 VLDLRP98155 873 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 PSG6Q00889 435 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 BSPH1Q075Z2 132 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 LOXL1Q08397 574 aaPredicted RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 ZNF155Q12901 538 aaPredicted RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 IFT88Q13099 833 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 TRIM25Q14258 630 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 TAB1Q15750 504 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 FAM83EQ2M2I3 478 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 GLYR1Q49A26 553 aaPredicted RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 SH2D4BQ5SQS7 431 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 GRTP1Q5TC63 336 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 TTC19Q6DKK2 380 aaPredicted RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 MFSD12Q6NUT3 480 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 METTL2BQ6P1Q9 378 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 C11orf88Q6PI97 169 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 SLC22A25Q6T423 547 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 KLHL24Q6TFL4 600 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 TFAP2EQ6VUC0 442 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 GALNT10Q86SR1 603 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 MARCH3Q86UD3 253 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 DTX2Q86UW9 622 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 STK32CQ86UX6 486 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 GABRG1Q8N1C3 465 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 ARIH2OSQ8N7S6 290 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 STEAP2Q8NFT2 490 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 OR7G2Q8NG99 324 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 UHMK1Q8TAS1 419 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 DUSP19Q8WTR2 217 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 STON2Q8WXE9 905 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 MTBPQ96DY7 904 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 FAM120BQ96EK7 910 aaKnown RBP5.19□□□□□ -1.58
VPS33B-207ENST00000557470 ADGRG7Q96K78 797 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 GPR78Q96P69 363 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 TNFRSF13CQ96RJ3 184 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 NPAS1Q99742 590 aa5.19□□□□□ -1.58
VPS33B-207ENST00000557470 RHNO1Q9BSD3 238 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms