RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 FOXF1Q12946 379 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 NFYCQ13952 458 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 TMEM176BQ3YBM2 270 aaPredicted RBP7.06□□□□□ -1.28
PSEN1-222ENST00000557356 GCNT6Q5T4J0 391 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 INTS11Q5TA45 600 aaKnown RBP7.06□□□□□ -1.28
PSEN1-222ENST00000557356 RNF220Q5VTB9 566 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 FAM214BQ7L5A3 538 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 LIX1LQ8IVB5 337 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 C9orf106Q8NAJ2 232 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 ACBD4Q8NC06 268 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 C11orf65Q8NCR3 313 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 FAM71CQ8NEG0 241 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 OR5M1Q8NGP8 315 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 FAM222BQ8WU58 562 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 ZG16BQ96DA0 208 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 ZNF845Q96IR2 970 aaPredicted RBP7.06□□□□□ -1.28
PSEN1-222ENST00000557356 CGREF1Q99674 301 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 USB1Q9BQ65 265 aaKnown RBP7.06□□□□□ -1.28
PSEN1-222ENST00000557356 ZNF559Q9BR84 538 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 ZNF385DQ9H6B1 395 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 KLHL28Q9NXS3 571 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 VAPAQ9P0L0 249 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 SLC13A4Q9UKG4 626 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 HDGFL3Q9Y3E1 203 aa7.06□□□□□ -1.28
PSEN1-222ENST00000557356 DIDO1Q9BTC0 2240 aaKnown RBP7.06□□□□□ -1.28
PSEN1-222ENST00000557356 DSPPQ9NZW4 1301 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 A0A0J9YW62 118 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 A0A1W2PNV4 684 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 PRAMEF27A3QJZ7 478 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CDHR4A6H8M9 788 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TUBAL3A6NHL2 446 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 A8MXE2 369 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 B4DXG7 233 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 SULT2B1O00204 365 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 NDUFAB1O14561 156 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TNFSF11O14788 317 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CASKO14936 926 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 ZNF208O43345 1280 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CXCL13O43927 109 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 EIF1BO60739 113 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TGM6O95932 706 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 IFNA14P01570 189 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 ARAFP10398 606 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TFPIP10646 304 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CD8BP10966 210 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 IGFBP2P18065 325 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 GRNP28799 593 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 SFTPDP35247 375 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 SLC1A3P43003 542 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 KIR2DL3P43628 341 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CPA2P48052 419 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 IDH2P48735 452 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 POLR2HP52434 150 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CDK6Q00534 326 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TFF3Q07654 80 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 FUT5Q11128 374 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 MYBPHQ13203 477 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CDSNQ15517 529 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 MAPK14Q16539 360 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 RUNDC3AQ59EK9 446 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 ZNF311Q5JNZ3 666 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 PAGE3Q5JUK9 113 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TMEM201Q5SNT2 666 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 MRPL2Q5T653 305 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 ZNF787Q6DD87 383 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 WBP2NLQ6ICG8 309 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 PPP4R4Q6NUP7 873 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 DLEU7Q6UYE1 221 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TMPPEQ6ZT21 453 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 PLEKHM3Q6ZWE6 761 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CPLX4Q7Z7G2 160 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 DHDDSQ86SQ9 333 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 GGNQ86UU5 652 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CNEP1R1Q8N9A8 125 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 HIPK4Q8NE63 616 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 OR6K3Q8NGY3 331 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 RP9Q8TA86 221 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 FNDC9Q8TBE3 224 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 POC1BQ8TC44 478 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 RASSF5Q8WWW0 418 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CNOT9Q92600 299 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 DDIT4LQ96D03 193 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 AURKBQ96GD4 344 aaPredicted RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TMEM19Q96HH6 336 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 ADGRG7Q96K78 797 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 ANKRD27Q96NW4 1050 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 ZNF317Q96PQ6 595 aaPredicted RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 RBM24Q9BX46 236 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 SAR1AQ9NR31 198 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 PLSCR4Q9NRQ2 329 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 SLC6A13Q9NSD5 602 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 DNAJB12Q9NXW2 375 aaKnown RBP7.05□□□□□ -1.28
PSEN1-222ENST00000557356 SLC25A37Q9NYZ2 338 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 JKAMPQ9P055 326 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 KLHL9Q9P2J3 617 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 RPS6KB2Q9UBS0 482 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 CHRNA9Q9UGM1 479 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 ANGPT4Q9Y264 503 aa7.05□□□□□ -1.28
PSEN1-222ENST00000557356 TRAPPC4Q9Y296 219 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms