RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	RNPS1	Q15287	305 aa	Known RBP	4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PPP1R3A	Q16821	1122 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PAGE2B	Q5JRK9	111 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	KLHL17	Q6TDP4	642 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	RINL	Q6ZS11	566 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076		Q6ZT83	130 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PRUNE1	Q86TP1	453 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	LUZP1	Q86V48	1076 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	TDRP	Q86YL5	185 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	LAS2	Q8IYD9	372 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PQLC1	Q8N2U9	271 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SVOPL	Q8N434	492 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	NKAP	Q8N5F7	415 aa	Known RBP	4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZDHHC22	Q8N966	263 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	CCDC89	Q8N998	374 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	TRIM58	Q8NG06	486 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR2M3	Q8NG83	312 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR4K17	Q8NGC6	315 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR10D3	Q8NH80	312 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	FAM110B	Q8TC76	370 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	OSTF1	Q92882	214 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	UBE2E3	Q969T4	207 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	TMEM186	Q96B77	213 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	CMTM7	Q96FZ5	175 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	ADGRG7	Q96K78	797 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PKP2	Q99959	881 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	EFCAB11	Q9BUY7	163 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	MS4A8	Q9BY19	250 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PTGES2	Q9H7Z7	377 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	DDX31	Q9H8H2	851 aa	Known RBP	4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	WDR41	Q9HAD4	459 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	NTN4	Q9HB63	628 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SMYD2	Q9NRG4	433 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SDHAF3	Q9NRP4	125 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	DDX28	Q9NUL7	540 aa	Known RBP	4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	LMBRD1	Q9NUN5	540 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	HIF1AN	Q9NWT6	349 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	ASB6	Q9NWX5	421 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	LYAR	Q9NX58	379 aa	Known RBP	4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	NPAP1	Q9NZP6	1156 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PRODH2	Q9UF12	536 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF639	Q9UID6	485 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	POU2F3	Q9UKI9	436 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	NOTCH3	Q9UM47	2321 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TRGV11	A0A075B6L2	103 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	GLOD5	A6NK44	160 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR5H1	A6NKK0	313 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076		H3BML4	177 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	CLGN	O14967	610 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	FADS1	O60427	444 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	PRKRA	O75569	313 aa	Known RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	NTN1	O95631	604 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	BCL10	O95999	233 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	F7	P08709	466 aa	Predicted RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	FAM58BP	P0C7Q3	252 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	NR2F6	P10588	404 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	MLN	P12872	115 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	POR	P16435	677 aa	Predicted RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	GGT1	P19440	569 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TPSB2	P20231	275 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TCEA1	P23193	301 aa	Known RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	GCH1	P30793	250 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	PIK3CB	P42338	1070 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	SSR2	P43308	183 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	MAGEA6	P43360	314 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	EMD	P50402	254 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	CARD18	P57730	90 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	PROK1	P58294	105 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	UBA52	P62987	128 aa	Known RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	MRPS22	P82650	360 aa	Known RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TPSAB1	Q15661	275 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ADRM1	Q16186	407 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	PRICKLE4	Q2TBC4	344 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	HSP90AA5P	Q58FG0	334 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ARL13A	Q5H913	290 aa	Predicted RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TOR2A	Q5JU69	321 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	CDKL4	Q5MAI5	379 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	PDSS1	Q5T2R2	415 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	C1QTNF12	Q5T7M4	302 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	CPTP	Q5TA50	214 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ADNP2	Q6IQ32	1131 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF529	Q6P280	563 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	B3GLCT	Q6Y288	498 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	NUFIP2	Q7Z417	695 aa	Known RBP	4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	GALNT7	Q86SF2	657 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	GALNT10	Q86SR1	603 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TUSC5	Q8IXB3	177 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF786	Q8N393	782 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	SPATA6L	Q8N4H0	392 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	UBL4B	Q8N7F7	174 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR7G3	Q8NG95	312 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR4K14	Q8NGD5	310 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR5M1	Q8NGP8	315 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	DUSP19	Q8WTR2	217 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	ATG4A	Q8WYN0	398 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	TMBIM1	Q969X1	311 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	NXNL1	Q96CM4	212 aa		4.09	□□□□□ -1.75
SCFD1-223	ENST00000557076	MTBP	Q96DY7	904 aa		4.09	□□□□□ -1.75

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