RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 DNAJB12Q9NXW2 375 aaKnown RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 MKLN1Q9UL63 735 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 PCDHGB4Q9UN71 923 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 TESMINQ9Y4I5 508 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 GPC6Q9Y625 555 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-224ENST00000556737 HEATR5AQ86XA9 2040 aa9.25□□□□□ -0.93
SHMT2-224ENST00000556737 HIVEP1P15822 2718 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 A0A1W2PPR1 153 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 SH3D21A4FU49 640 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 CCDC154A6NI56 674 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 H3BNH8 94 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 ANGPT2O15123 496 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 ATP5HO75947 161 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 H6PDO95479 791 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 AGR2O95994 175 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 CHRM4P08173 479 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 EPXP11678 715 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 CALB2P22676 271 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 ME2P23368 584 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 ADH6P28332 368 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 ADSLP30566 484 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 DNAJA1P31689 397 aaKnown RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 SFTPDP35247 375 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 CHI3L1P36222 383 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 PGM1P36871 562 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 PCYT1AP49585 367 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 RASSF2P50749 326 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 QPRTQ15274 297 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 MAPK11Q15759 364 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 GTDC1Q4AE62 458 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 COX20Q5RI15 118 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 HBMQ6B0K9 141 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 DNAJC14Q6Y2X3 702 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 FAM214BQ7L5A3 538 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 LSRQ86X29 649 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 RNF130Q86XS8 419 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 CDC20BQ86Y33 519 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 LILRA2Q8N149 483 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 GLB1L3Q8NCI6 653 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 TOR1AIP2Q8NFQ8 470 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 OR5W2Q8NH69 310 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 RP9Q8TA86 221 aaKnown RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 RNF128Q8TEB7 428 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 XAGE5Q8WWM1 108 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 OIT3Q8WWZ8 545 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 ROPN1LQ96C74 230 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 MRGPRX4Q96LA9 322 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 OR52E6Q96RD3 313 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 PANX1Q96RD7 426 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 POLDIP3Q9BY77 421 aaKnown RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 LAT2Q9GZY6 243 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 SLC38A1Q9H2H9 487 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 LIME1Q9H400 295 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 ZNF385DQ9H6B1 395 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 EXD2Q9NVH0 621 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 PAQR5Q9NXK6 330 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-224ENST00000556737 ZIM2Q9NZV7 527 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 CLEC4AQ9UMR7 237 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 WDR45Q9Y484 360 aa9.24□□□□□ -0.93
SHMT2-224ENST00000556737 SPG11Q96JI7 2443 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 CLDN24A6NM45 220 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 GTPBP1O00178 669 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 AIM2O14862 343 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 SIAH2O43255 324 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 ADAM11O75078 769 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 GOSR1O95249 250 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 NUDT14O95848 222 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 CSTAP01040 98 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 HRGP04196 525 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 GSNP06396 782 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 UBTFL6P0CB48 400 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 HOXB9P17482 250 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 RPS4Y1P22090 263 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 PRDX6P30041 224 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 CD79BP40259 229 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 MRPL19P49406 292 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 NUDT2P50583 147 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 CCR4P51679 360 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 MNAT1P51948 309 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 POLR2JP52435 117 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 CHRNEQ04844 493 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 FAM27E3Q08E93 113 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 LRRC74AQ0VAA2 488 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 SELENBP1Q13228 472 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 CBFBQ13951 182 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 SYPL1Q16563 259 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 SGCBQ16585 318 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 TIGD2Q4W5G0 525 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 ATAD3BQ5T9A4 648 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 FAM91A1Q658Y4 838 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 MSANTD1Q6ZTZ1 278 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 HMGN2P46Q86SG4 172 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 ZNF619Q8N2I2 560 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 ANKFN1Q8N957 763 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 ZNF610Q8N9Z0 462 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 OR6K3Q8NGY3 331 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 PNPT1Q8TCS8 783 aaKnown RBP9.23□□□□□ -0.93
SHMT2-224ENST00000556737 ZFP90Q8TF47 636 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 ZG16BQ96DA0 208 aa9.23□□□□□ -0.93
SHMT2-224ENST00000556737 SPDL1Q96EA4 605 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms