RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 C2orf72A6NCS6 295 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 ARRDC5A6NEK1 342 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 SAC3D1A6NKF1 404 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 LINC01387J3KSC0 135 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 ACOT7O00154 380 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 FFAR1O14842 300 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 GMFGO60234 142 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 NME2P1O60361 137 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 OR10H3O60404 316 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 TPST2O60704 377 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 TRIM3O75382 744 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-218ENST00000556343 NEURL1O76050 574 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 F10P00742 488 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 C1QTNF9P0C862 333 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 NME2P22392 152 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 DPP4P27487 766 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 HTR2AP28223 471 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 SRD5A2P31213 254 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 PTDSS1P48651 473 aaKnown RBP8.39□□□□□ -1.07
ACTN1-218ENST00000556343 HSPA13P48723 471 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 TNFSF10P50591 281 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 MERTKQ12866 999 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 FOXD4Q12950 439 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-218ENST00000556343 TOMM20Q15388 145 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 TBR1Q16650 682 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 EXOC3L2Q2M3D2 409 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 RFX4Q33E94 735 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 OGFRL1Q5TC84 451 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-218ENST00000556343 OR5M10Q6IEU7 315 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 HMBOX1Q6NT76 420 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 CBLN3Q6UW01 205 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 MDGA2Q7Z553 956 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 COMTD1Q86VU5 262 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 SULF2Q8IWU5 870 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 FADS6Q8N9I5 356 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 WDSUB1Q8N9V3 476 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 KDF1Q8NAX2 398 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-218ENST00000556343 MDS2Q8NDY4 140 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 OR10G2Q8NGC3 310 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 PIGXQ8TBF5 258 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 GNPDA2Q8TDQ7 276 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 SNRNP27Q8WVK2 155 aaKnown RBP8.39□□□□□ -1.07
ACTN1-218ENST00000556343 TMEM239Q8WW34 195 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 C1GALT1C1Q96EU7 318 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 MRGPRX4Q96LA9 322 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 SIGLEC12Q96PQ1 595 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 WFDC6Q9BQY6 131 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 NDEL1Q9GZM8 345 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 NTN4Q9HB63 628 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 MED17Q9NVC6 651 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 OAZ3Q9UMX2 235 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 MGAT4BQ9UQ53 548 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 TMEM5Q9Y2B1 443 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 MED31Q9Y3C7 131 aa8.39□□□□□ -1.07
ACTN1-218ENST00000556343 CEP295Q9C0D2 2601 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 A0A087WUJ7 227 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 MED19A0JLT2 244 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-218ENST00000556343 SH3PXD2BA1X283 911 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 GJE1A6NN92 205 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 H0YJX3 145 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 OIP5O43482 229 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 BCAS1O75363 584 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-218ENST00000556343 TRAPPC6AO75865 159 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 RASAL1O95294 804 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 HPRP00739 348 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 SFTPCP11686 197 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 HK1P19367 917 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 GSTM3P21266 225 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 TACR3P29371 465 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 DNASE1L1P49184 302 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 ST13P50502 369 aaKnown RBP8.38□□□□□ -1.07
ACTN1-218ENST00000556343 ALDH3A2P51648 485 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 RAD23AP54725 363 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 UGT2B15P54855 530 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 DLX5P56178 289 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 COX10Q12887 443 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 DAG1Q14118 895 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 SLC25A53Q5H9E4 307 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 OTUD3Q5T2D3 398 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-218ENST00000556343 LPCAT4Q643R3 524 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 PPP4R4Q6NUP7 873 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 PODNL1Q6PEZ8 512 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 MBOAT2Q6ZWT7 520 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 GALNTL5Q7Z4T8 443 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 TSEN54Q7Z6J9 526 aaKnown RBP8.38□□□□□ -1.07
ACTN1-218ENST00000556343 SLC22A16Q86VW1 577 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 OR2M7Q8NG81 312 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 OR4C15Q8NGM1 316 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 MAGEE2Q8TD90 523 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-218ENST00000556343 STK35Q8TDR2 534 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 C3orf49Q96BT1 292 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 DDIT4LQ96D03 193 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 SCMH1Q96GD3 660 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 RDH12Q96NR8 316 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 GNRHR2Q96P88 292 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 CIB1Q99828 191 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 PSD2Q9BQI7 771 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 PIGQQ9BRB3 760 aa8.38□□□□□ -1.07
ACTN1-218ENST00000556343 TMEM43Q9BTV4 400 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms