RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	ZNF576	Q9H609	170 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	MBNL1	Q9NR56	388 aa	Known RBP	11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	KLRF1	Q9NZS2	232 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	CACNA1I	Q9P0X4	2223 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	TRAPPC6A	O75865	159 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	THEGL	P0DJG4	465 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	EIF5A	P63241	154 aa	Known RBP	11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	KLHDC8A	Q8IYD2	350 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	TMIE	Q8NEW7	156 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	OR4K14	Q8NGD5	310 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	FGF14	Q92915	247 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	OR2B2	Q9GZK3	357 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	HOXD1	Q9GZZ0	328 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	STARD5	Q9NSY2	213 aa		11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	APOBEC3B	Q9UH17	382 aa	Known RBP	11.48	□□□□□ -0.57
TMPO-212	ENST00000556029	THSD7B	Q9C0I4	1608 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF254	O75437	659 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	SLC6A6	P31641	620 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	BEX5	Q5H9J7	111 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	SLX4IP	Q5VYV7	408 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	GDPGP1	Q6ZNW5	385 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029		Q6ZSR6	202 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	ZNF227	Q86WZ6	799 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	CAMKV	Q8NCB2	501 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	VN1R2	Q8NFZ6	395 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	SLC35B4	Q969S0	331 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	NEURL3	Q96EH8	262 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	PTCHD1	Q96NR3	888 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	HHATL	Q9HCP6	504 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	CD207	Q9UJ71	328 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	DCDC2B	A2VCK2	349 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	TVP23A	A6NH52	213 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	PLPP1	O14494	284 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	AHSA1	O95433	338 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	PIP	P12273	146 aa	Predicted RBP	11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	LSS	P48449	732 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	SNRPG	P62308	76 aa	Known RBP	11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	EEF1A2	Q05639	463 aa	Known RBP	11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	PRSS53	Q2L4Q9	553 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	CARD17	Q5XLA6	110 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	TCEAL6	Q6IPX3	200 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	CNIH2	Q6PI25	160 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	NATD1	Q8N6N6	113 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	OR5D16	Q8NGK9	328 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	OR52P1P	Q8NH57	321 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	ACOT12	Q8WYK0	555 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	RNF121	Q9H920	327 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	USP36	Q9P275	1121 aa	Known RBP	11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	EPHA6	Q9UF33	1036 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	TRAV18	A0A075B6X5	111 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029		A0A1W2PQ09	198 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	NPIPA5	E9PKD4	350 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	SYPL1	Q16563	259 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	TCTN3	Q6NUS6	607 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	PAQR6	Q6TCH4	344 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	IL20RB	Q6UXL0	311 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	TMEM156	Q8N614	296 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	ZMYND19	Q96E35	227 aa	Predicted RBP	11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	LMAN1L	Q9HAT1	526 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	KCNN3	Q9UGI6	736 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	NPIPA1	Q9UND3	350 aa		11.47	□□□□□ -0.57
TMPO-212	ENST00000556029	FFAR1	O14842	300 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	LYRM1	O43325	122 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	ERP29	P30040	261 aa	Known RBP	11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	TGM4	P49221	684 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	LCTL	Q6UWM7	567 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	PDZD3	Q86UT5	571 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	TMEFF1	Q8IYR6	380 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	OR52E1	Q8NGJ3	308 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	NPRL2	Q8WTW4	380 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	RIT1	Q92963	219 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	TOE1	Q96GM8	510 aa	Known RBP	11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	INSM2	Q96T92	566 aa	Predicted RBP	11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	A4GALT	Q9NPC4	353 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	NBAS	A2RRP1	2371 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	CNOT1	A5YKK6	2376 aa	Known RBP	11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	NPIPA5	A0A0B4J1W7	369 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	ARRDC5	A6NEK1	342 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	NPIPA7	E9PJI5	369 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	MSL3P1	P0C860	447 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	NPIPA8	P0DM63	369 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	ATAD3C	Q5T2N8	411 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	TMEM225	Q6GV28	225 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	PODNL1	Q6PEZ8	512 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	ZSCAN1	Q8NBB4	408 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	IL17RD	Q8NFM7	739 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	OR56A1	Q8NGH5	318 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	VOPP1	Q96AW1	172 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	TM4SF18	Q96CE8	201 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	FOXN4	Q96NZ1	517 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	TGM7	Q96PF1	710 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	EPHX3	Q9H6B9	360 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	MAN2C1	Q9NTJ4	1040 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	OR6C2	Q9NZP2	312 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.46	□□□□□ -0.57
TMPO-212	ENST00000556029	CACNA1B	Q00975	2339 aa		11.46	□□□□□ -0.57
TMPO-212	ENST00000556029		A0A0A6YYH2	397 aa		11.46	□□□□□ -0.58
TMPO-212	ENST00000556029		A6NJ64	397 aa		11.46	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms