RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PEX12O00623 359 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 P2RX6O15547 441 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TNFSF14O43557 240 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PLPP2O43688 288 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 CTSVO60911 334 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 CPNE3O75131 537 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 GPR75O95800 540 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 MRPL3P09001 348 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 IFI6P09912 130 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SBK2P0C263 348 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SMIM10L1P0DMW3 83 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ZNF19P17023 458 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FUT1P19526 365 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NPR2P20594 1047 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TBXA2RP21731 343 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 AK4P27144 223 aaPredicted RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 SLC6A1P30531 599 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 GABRA3P34903 492 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 RBM34P42696 430 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 GZMKP49863 264 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NRG3P56975 720 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 GNG2P59768 71 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ACTA2P62736 377 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ACTG2P63267 376 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PITPNAQ00169 270 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TNK1Q13470 666 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 RUNX2Q13950 521 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 EFR3AQ14156 821 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NFATC4Q14934 902 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ANGPT1Q15389 498 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ZNHIT3Q15649 155 aaPredicted RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 MAPK14Q16539 360 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SNAP47Q5SQN1 464 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 C1QTNF12Q5T7M4 302 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FHL5Q5TD97 284 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PYHIN1Q6K0P9 492 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FBXO42Q6P3S6 717 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FIGNL1Q6PIW4 674 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FIGLAQ6QHK4 219 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 WDR88Q6ZMY6 472 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 RTL4Q6ZR62 310 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ASB18Q6ZVZ8 466 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 VASH1Q7L8A9 365 aaPredicted RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 KRT74Q7RTS7 529 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NANOGNBQ7Z5D8 188 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 OAFQ86UD1 273 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 GLCCI1Q86VQ1 547 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SLC44A3Q8N4M1 653 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ZNF614Q8N883 585 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 OR4M1Q8NGD0 313 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ABHD4Q8TB40 342 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TRMT10AQ8TBZ6 339 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 GRHL3Q8TE85 626 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ASB12Q8WXK4 309 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 OR1E3Q8WZA6 343 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SMPDL3BQ92485 455 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 RSC1A1Q92681 617 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 KISS1RQ969F8 398 aaPredicted RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 SMIM10Q96HG1 83 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 C4orf36Q96KX1 117 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ZFYVE21Q9BQ24 234 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TRIM2Q9C040 744 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 MKRN2Q9H000 416 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 MED28Q9H204 178 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ABCG5Q9H222 651 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NKX2-4Q9H2Z4 354 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ACOXLQ9NUZ1 547 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 MAT2BQ9NZL9 334 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SCML1Q9UN30 329 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SIGLEC7Q9Y286 467 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 YBX2Q9Y2T7 364 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 CACNG2Q9Y698 323 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 CHD9Q3L8U1 2897 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 DOCK8Q8NF50 2099 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TRBV23OR9-2A0A075B6M9 112 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TRAV27A0A087WT01 109 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NPIPA5A0A0B4J1W7 369 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 POM121BA6NF01 834 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NPIPA7E9PJI5 369 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 EEF1E1O43324 174 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 CHP2O43745 196 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FGF17O60258 216 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 OR10H2O60403 315 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 BRINP1O60477 761 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 LDB3O75112 727 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ARL6IP5O75915 188 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ALX3O95076 343 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 RASGRP1O95267 797 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PPP1R3DO95685 299 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 APBB3O95704 486 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 EML2O95834 649 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 EIF4EP06730 217 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 FAM157BP0CG42 384 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NPIPA8P0DM63 369 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PEPDP12955 493 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 POLR2CP19387 275 aaPredicted RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 RAB3BP20337 219 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SHC1P29353 583 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PYCR1P32322 319 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms