RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RPL13AP3Q6NVV1 102 aa22.34■■□□□ 1.17
TMEM260-207ENST00000555497 GATAD2AQ86YP4 633 aa22.34■■□□□ 1.17
TMEM260-207ENST00000555497 PTPMT1Q8WUK0 201 aaPredicted RBP22.34■■□□□ 1.17
TMEM260-207ENST00000555497 ASB15Q8WXK1 588 aa22.34■■□□□ 1.17
TMEM260-207ENST00000555497 ZNF578Q96N58 590 aaPredicted RBP22.34■■□□□ 1.17
TMEM260-207ENST00000555497 JAM3Q9BX67 310 aa22.34■■□□□ 1.17
TMEM260-207ENST00000555497 CABIN1Q9Y6J0 2220 aa22.34■■□□□ 1.17
TMEM260-207ENST00000555497 TMEM265A0A087WTH1 108 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 SMIM30A4D0T7 59 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 C17orf105B2RV13 164 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 SLC30A4O14863 429 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 IL1AP01583 271 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 EPHA4P54764 986 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 CRYZQ08257 329 aaKnown RBP22.33■■□□□ 1.17
TMEM260-207ENST00000555497 CD200R1LQ6Q8B3 271 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 ZNF322Q6U7Q0 402 aaPredicted RBP22.33■■□□□ 1.17
TMEM260-207ENST00000555497 OAFQ86UD1 273 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 SPEM1Q8N4L4 309 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 EFHD2Q96C19 240 aaPredicted RBP22.33■■□□□ 1.17
TMEM260-207ENST00000555497 SENP5Q96HI0 755 aaPredicted RBP22.33■■□□□ 1.17
TMEM260-207ENST00000555497 SLC30A2Q9BRI3 323 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 YIPF2Q9BWQ6 316 aa22.33■■□□□ 1.17
TMEM260-207ENST00000555497 IGHV1OR21-1A0A087WYE8 117 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 ISPDA4D126 451 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 CCDC182A6NF36 153 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 SERINC4A6NH21 518 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 TMEM150CB9EJG8 249 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 OR2B3O76000 313 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 CSTAP01040 98 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 CLUP10909 449 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 ALAS2P22557 587 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 RBM34P42696 430 aaKnown RBP22.33■■□□□ 1.16
TMEM260-207ENST00000555497 KLHL12Q53G59 568 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 VASNQ6EMK4 673 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 ZNF550Q7Z398 422 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 OR52N1Q8NH53 320 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 HLA-CQ95604 372 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 CLIP3Q96DZ5 547 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 PNO1Q9NRX1 252 aaKnown RBP22.33■■□□□ 1.16
TMEM260-207ENST00000555497 DHCR7Q9UBM7 475 aaKnown RBP22.33■■□□□ 1.16
TMEM260-207ENST00000555497 WNT16Q9UBV4 365 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 PLEKHB1Q9UF11 243 aaPredicted RBP22.33■■□□□ 1.16
TMEM260-207ENST00000555497 FBXL4Q9UKA2 621 aa22.33■■□□□ 1.16
TMEM260-207ENST00000555497 C12orf71A8MTZ7 269 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 A8MUA0 341 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 RGS5O15539 181 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 REM1O75628 298 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 EFNA3P52797 238 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 HNRNPA0Q13151 305 aaKnown RBP22.32■■□□□ 1.16
TMEM260-207ENST00000555497 INSL4Q14641 139 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 ULK3Q6PHR2 472 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 LAX1Q8IWV1 398 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 CYB561A3Q8NBI2 242 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 TSLPQ969D9 159 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 AHCYL2Q96HN2 611 aaKnown RBP22.32■■□□□ 1.16
TMEM260-207ENST00000555497 KCTD7Q96MP8 289 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 TBX5Q99593 518 aa22.32■■□□□ 1.16
TMEM260-207ENST00000555497 ARID1BQ8NFD5 2236 aaPredicted RBP22.32■■□□□ 1.16
TMEM260-207ENST00000555497 FAM86C2PA6NEL3 165 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 CELP19835 753 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 ACSM1Q08AH1 577 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 SERTAD2Q14140 314 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 SNAP47Q5SQN1 464 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 KLBQ86Z14 1044 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 SDR16C5Q8N3Y7 309 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 SLC25A45Q8N413 288 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 CEP19Q96LK0 163 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 LRRN3E7EW58 273 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 PRR23D1E9PI22 279 aaPredicted RBP22.31■■□□□ 1.16
TMEM260-207ENST00000555497 PRR23D2P0DMB1 279 aaPredicted RBP22.31■■□□□ 1.16
TMEM260-207ENST00000555497 GALNSP34059 522 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 DMWDQ09019 674 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 CRMP1Q14194 572 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.31■■□□□ 1.16
TMEM260-207ENST00000555497 KLHL26Q53HC5 615 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 SLC35F3Q8IY50 421 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 CADM3Q8N126 398 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 LRRC17Q8N6Y2 441 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 ARIH2OSQ8N7S6 290 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 POC5Q8NA72 575 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 GATSQ8NAP1 163 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 SLC35B4Q969S0 331 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 TEAD3Q99594 435 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 TMED9Q9BVK6 235 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 OR51V1Q9H2C8 321 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 LRRN3Q9H3W5 708 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 SLC35A3Q9Y2D2 325 aa22.31■■□□□ 1.16
TMEM260-207ENST00000555497 RP1P56715 2156 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 IQCMA0A1B0GVH7 501 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 PSMD4P55036 377 aaKnown RBP22.3■■□□□ 1.16
TMEM260-207ENST00000555497 SLC37A1P57057 533 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 PSPHP78330 225 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 ACBD7Q8N6N7 88 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 Q8N9G6 341 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-207ENST00000555497 OR1L3Q8NH93 324 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 KATNB1Q9BVA0 655 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 HDHD5Q9BXW7 423 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 TBC1D17Q9HA65 648 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 INIPQ9NRY2 104 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 GMEB2Q9UKD1 530 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms