RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PABPC4LP0CB38 370 aaKnown RBP10.88□□□□□ -0.67
SRP54-206ENST00000555317 PSMA4P25789 261 aaKnown RBP10.88□□□□□ -0.67
SRP54-206ENST00000555317 PEX19P40855 299 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 CARD18P57730 90 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 COPZ1P61923 177 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 TFF3Q07654 80 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 CYP51A1Q16850 503 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 TMEM176BQ3YBM2 270 aaPredicted RBP10.88□□□□□ -0.67
SRP54-206ENST00000555317 RPS26P11Q5JNZ5 115 aaPredicted RBP10.88□□□□□ -0.67
SRP54-206ENST00000555317 MRPL2Q5T653 305 aaKnown RBP10.88□□□□□ -0.67
SRP54-206ENST00000555317 PRAMEF8Q5VWM4 474 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 PRAMEF7Q5VXH5 474 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 AP1ARQ63HQ0 302 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 GDF7Q7Z4P5 450 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 KRT73Q86Y46 540 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 DPP10Q8N608 796 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 FAM71CQ8NEG0 241 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 FIG4Q92562 907 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 MAL2Q969L2 176 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 ZNF845Q96IR2 970 aaPredicted RBP10.88□□□□□ -0.67
SRP54-206ENST00000555317 NPAS1Q99742 590 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 KLHDC3Q9BQ90 382 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 PIGMQ9H3S5 423 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 ACER3Q9NUN7 267 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 SLC25A37Q9NYZ2 338 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 SLAMF8Q9P0V8 285 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 FOXD3Q9UJU5 478 aaPredicted RBP10.88□□□□□ -0.67
SRP54-206ENST00000555317 ZNF443Q9Y2A4 671 aaPredicted RBP10.88□□□□□ -0.67
SRP54-206ENST00000555317 IFT52Q9Y366 437 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 CAPN7Q9Y6W3 813 aa10.88□□□□□ -0.67
SRP54-206ENST00000555317 A0A1W2PNV4 684 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 CFAP73A6NFT4 308 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 CLDN24A6NM45 220 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 ADAMDEC1O15204 470 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 CXCL13O43927 109 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 SMNDC1O75940 238 aaKnown RBP eCLIP10.87□□□□□ -0.67
SRP54-206ENST00000555317 THBS1P07996 1170 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 NUDT7P0C024 238 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 TFPIP10646 304 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 IL11P20809 199 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 RPS4Y1P22090 263 aaKnown RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 SLC6A2P23975 617 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 APOBEC1P41238 236 aaKnown RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 HTR3AP46098 478 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 CTBP2P56545 445 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 SESN3P58005 492 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 SIRPAP78324 504 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 CDK6Q00534 326 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 FOXF2Q12947 444 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 MYBPHQ13203 477 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 SLC25A53Q5H9E4 307 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 ZNF311Q5JNZ3 666 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 GTF2IRD2BQ6EKJ0 949 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 CGB2Q6NT52 195 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 REEP3Q6NUK4 255 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 ZNF836Q6ZNA1 936 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 GRINAQ7Z429 371 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 GTF2IRD2Q86UP8 949 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 KIF18BQ86Y91 864 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 MSRB3Q8IXL7 192 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 RELL2Q8NC24 303 aaPredicted RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 NFKBIDQ8NI38 313 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 SLC25A43Q8WUT9 341 aaPredicted RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 CNOT9Q92600 299 aaKnown RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 OSTF1Q92882 214 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 RNASE6Q93091 150 aaKnown RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 CPNE4Q96A23 557 aaPredicted RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 ZNF607Q96SK3 696 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 CGREF1Q99674 301 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 SPATA5L1Q9BVQ7 753 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 FAM107BQ9H098 131 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 SLC52A3Q9NQ40 469 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 NPDC1Q9NQX5 325 aaPredicted RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 DNAJB12Q9NXW2 375 aaKnown RBP10.87□□□□□ -0.67
SRP54-206ENST00000555317 SLC13A4Q9UKG4 626 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 PACSIN3Q9UKS6 424 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 ANGPT4Q9Y264 503 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 EMC9Q9Y3B6 208 aa10.87□□□□□ -0.67
SRP54-206ENST00000555317 DSPPQ9NZW4 1301 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 A0A0J9YW62 118 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 CDHR4A6H8M9 788 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 BBIP1A8MTZ0 92 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 ETV2O00321 342 aaPredicted RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 DYNC1I1O14576 645 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 DNAJA2O60884 412 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 NTN1O95631 604 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 ARAFP10398 606 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 BMP2P12643 396 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 HOXB9P17482 250 aaPredicted RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 SSTR2P30874 369 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 CPOXP36551 454 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 IDH2P48735 452 aaKnown RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 CYLC2Q14093 348 aaPredicted RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 SCARB2Q14108 478 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 CTU2Q2VPK5 515 aaKnown RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 TRMT5Q32P41 509 aaKnown RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 RNF220Q5VTB9 566 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 DLEU7Q6UYE1 221 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 PLEKHM3Q6ZWE6 761 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 ZNF550Q7Z398 422 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms