RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 C3orf38Q5JPI3 329 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 TRIQKQ629K1 86 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 FAM26EQ8N5C1 309 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 CAMKK1Q8N5S9 505 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 CITED4Q96RK1 184 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 LMF1Q96S06 567 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 KCNJ15Q99712 375 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 BEX2Q9BXY8 128 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 PIGUQ9H490 435 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 ENTPD2Q9Y5L3 495 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 LEUTXA8MZ59 168 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 IGKV1D-16P01601 117 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 ATP1B1P05026 303 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 CFL1P23528 166 aaKnown RBP13.72□□□□□ -0.21
XRCC3-211ENST00000555055 SMSP52788 366 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 TPBGQ13641 420 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 SYT13Q7L8C5 426 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 PIGXQ8TBF5 258 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 CNOT9Q92600 299 aaKnown RBP13.72□□□□□ -0.21
XRCC3-211ENST00000555055 RELTQ969Z4 430 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 RNFT2Q96EX2 444 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 SPACA7Q96KW9 195 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 COQ7Q99807 217 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 POLDIP3Q9BY77 421 aaKnown RBP13.72□□□□□ -0.21
XRCC3-211ENST00000555055 ZNF350Q9GZX5 532 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 TWSG1Q9GZX9 223 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 MRPS18AQ9NVS2 196 aaKnown RBP13.72□□□□□ -0.21
XRCC3-211ENST00000555055 SOHLH2Q9NX45 425 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 PTTG3PQ9NZH4 202 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 PTGFRNQ9P2B2 879 aa13.72□□□□□ -0.21
XRCC3-211ENST00000555055 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 IGHV5-51A0A0C4DH38 117 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 LINC00854A0A1B0GVQ3 168 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 SYT5O00445 386 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 PLD2O14939 933 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 FOXS1O43638 330 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 STX11O75558 287 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 RAB36O95755 333 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 CSF2P04141 144 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 SLC2A2P11168 524 aaPredicted RBP13.71□□□□□ -0.21
XRCC3-211ENST00000555055 UBL4AP11441 157 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 MAKP20794 623 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 CSNK1EP49674 416 aaKnown RBP13.71□□□□□ -0.21
XRCC3-211ENST00000555055 EMDP50402 254 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 BTG1P62324 171 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 INSL4Q14641 139 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 CDONQ4KMG0 1287 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 CD200R1LQ6Q8B3 271 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 QSOX2Q6ZRP7 698 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 TM9SF4Q92544 642 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 CREB3L1Q96BA8 519 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 SEMA6CQ9H3T2 930 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 TRIM45Q9H8W5 580 aaPredicted RBP13.71□□□□□ -0.21
XRCC3-211ENST00000555055 LYRM4Q9HD34 91 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 CALML5Q9NZT1 146 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 EIF3KQ9UBQ5 218 aaKnown RBP13.71□□□□□ -0.21
XRCC3-211ENST00000555055 SPACA6W5XKT8 324 aa13.71□□□□□ -0.21
XRCC3-211ENST00000555055 TMEM129A0AVI4 362 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 SOCS6O14544 535 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 LYRM1O43325 122 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 RFPL3O75679 317 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 SRFP11831 508 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 CCR5P51681 352 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 PSG6Q00889 435 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 COX10Q12887 443 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 TSPAN31Q12999 210 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 TDGQ13569 410 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 ZNF267Q14586 743 aaPredicted RBP13.71□□□□□ -0.22
XRCC3-211ENST00000555055 OR1Q1Q15612 314 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 SLC38A6Q8IZM9 456 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 ZNF619Q8N2I2 560 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 ZNF655Q8N720 491 aaPredicted RBP13.71□□□□□ -0.22
XRCC3-211ENST00000555055 GNPDA2Q8TDQ7 276 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 ACOT11Q8WXI4 607 aaPredicted RBP13.71□□□□□ -0.22
XRCC3-211ENST00000555055 MMABQ96EY8 250 aaPredicted RBP13.71□□□□□ -0.22
XRCC3-211ENST00000555055 ART5Q96L15 291 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 TBX5Q99593 518 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 SLC38A3Q99624 504 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 PRSS27Q9BQR3 290 aa13.71□□□□□ -0.22
XRCC3-211ENST00000555055 UBE2ZQ9H832 354 aaPredicted RBP13.71□□□□□ -0.22
XRCC3-211ENST00000555055 TESQ9UGI8 421 aaKnown RBP13.71□□□□□ -0.22
XRCC3-211ENST00000555055 HEATR5AQ86XA9 2040 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 TRAV27A0A087WT01 109 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 GMFGO60234 142 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 FXYD6P3P58550 94 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 RPL6Q02878 288 aaKnown RBP13.7□□□□□ -0.22
XRCC3-211ENST00000555055 STX4Q12846 297 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 PAMR1Q6UXH9 720 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 HDDC2Q7Z4H3 204 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 SLC51BQ86UW2 128 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 GHDCQ8N2G8 530 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 SDR16C5Q8N3Y7 309 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 GATSQ8NAP1 163 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 SYT14Q8NB59 555 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 ATP6V1C2Q8NEY4 427 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 FGF11Q92914 225 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 HSPA12BQ96MM6 686 aa13.7□□□□□ -0.22
XRCC3-211ENST00000555055 DCLRE1CQ96SD1 692 aaKnown RBP13.7□□□□□ -0.22
XRCC3-211ENST00000555055 TM9SF2Q99805 663 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms