RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TMED2Q15363 201 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MPPED2Q15777 294 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SNAPC1Q16533 368 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 IL17AQ16552 155 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF239Q16600 458 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 GUK1Q16774 197 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 HAGHQ16775 308 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 PTPN20Q4JDL3 420 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CTXN3Q4LDR2 81 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 C14orf28Q4W4Y0 310 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ASPRV1Q53RT3 343 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 FBXO47Q5MNV8 452 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 RAP1GAP2Q684P5 730 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CES5AQ6NT32 575 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 FAHD2BQ6P2I3 314 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 PNCKQ6P2M8 343 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 TRAT1Q6PIZ9 186 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 WDR59Q6PJI9 974 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MOXD1Q6UVY6 613 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SPESP1Q6UW49 350 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MBOAT1Q6ZNC8 495 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 EIF3MQ7L2H7 374 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ARCQ7LC44 396 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SHFQ7M4L6 423 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 TIPARPQ7Z3E1 657 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 PPP1R32Q7Z5V6 425 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 LDB1Q86U70 411 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SERINC5Q86VE9 423 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MYO18BQ8IUG5 2567 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 PQLC3Q8N755 202 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF283Q8N7M2 679 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OR1N1Q8NGS0 311 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OR13F1Q8NGS4 319 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OR2T34Q8NGX1 318 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OR2T3Q8NH03 318 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OR56A3Q8NH54 315 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 TRMT10AQ8TBZ6 339 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 C16orf78Q8WTQ4 265 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF689Q96CS4 500 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 DYNLL2Q96FJ2 89 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MED8Q96G25 268 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 FAHD2AQ96GK7 314 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 MS4A14Q96JA4 679 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF462Q96JM2 2506 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 C12orf66Q96MD2 445 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 COL21A1Q96P44 957 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 C11orf70Q9BRQ4 267 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 KATNB1Q9BVA0 655 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ING2Q9H160 280 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 POLR3FQ9H1D9 316 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ELOVL6Q9H5J4 265 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 REEP4Q9H6H4 257 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CCNB1IP1Q9NPC3 277 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SPAG4Q9NPE6 437 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 CHST11Q9NPF2 352 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 EIF2B3Q9NR50 452 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 PNO1Q9NRX1 252 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ACSS1Q9NUB1 689 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ZCCHC3Q9NUD5 404 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 FAM49BQ9NUQ9 324 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OLAHQ9NV23 265 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 LYARQ9NX58 379 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SIDT1Q9NXL6 827 aaKnown RBP4.08□□□□□ -1.76
ATXN3-227ENST00000554491 TAB2Q9NYJ8 693 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 WNT16Q9UBV4 365 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 SEC14L4Q9UDX3 406 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 UBQLN2Q9UHD9 624 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OPN4Q9UHM6 478 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF225Q9UK10 706 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 OR52A1Q9UKL2 312 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 FBXO4Q9UKT5 387 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 HECTD1Q9ULT8 2610 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 USP22Q9UPT9 525 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 PLEKHA6Q9Y2H5 1048 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 RNF11Q9Y3C5 154 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 A3GALT2U3KPV4 340 aa4.08□□□□□ -1.76
ATXN3-227ENST00000554491 DOCK5Q9H7D0 1870 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 AKAP13Q12802 2813 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 PLIN4Q96Q06 1357 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 TEX13DA0A0J9YY54 714 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-227ENST00000554491 SMIM35A0A1B0GVV1 85 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 TCRBV21S2A2A0A5A6 115 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 CIB4A0PJX0 185 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 TBC1D3FA6NER0 549 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-227ENST00000554491 MYMKA6NI61 221 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 SERPINE3A8MV23 424 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 MCIDASD6RGH6 385 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 PRRG1O14668 218 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 PHGDHO43175 533 aaKnown RBP4.07□□□□□ -1.76
ATXN3-227ENST00000554491 RAD51CO43502 376 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 CHST10O43529 356 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 TLX2O43763 284 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-227ENST00000554491 PRAMEF2O60811 474 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 NDUFS3O75489 264 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 ECI2O75521 394 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 RECQL5O94762 991 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-227ENST00000554491 VAMP5O95183 116 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 GADD45GO95257 159 aa4.07□□□□□ -1.76
ATXN3-227ENST00000554491 MT-CYBP00156 380 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms