RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 SMIM24O75264 130 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CSO75390 466 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 NOL4O94818 638 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 LCA5LO95447 670 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CXCL14O95715 111 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 GYPCP04921 128 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 TPBGLP0DKB5 382 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 POU2F1P14859 743 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 UCHL3P15374 230 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 ZNF10P21506 573 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 ALDH3A1P30838 453 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 NDUFV3P56181 108 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 YBEYP58557 167 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 RPS27AP62979 156 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 NOP14P78316 857 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 GALK2Q01415 458 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 GFPT1Q06210 699 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CUL2Q13617 745 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 WHAMMP3Q1A5X7 153 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 KLHL38Q2WGJ6 581 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CLLU1OSQ5K130 101 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 TTC23LQ6PF05 361 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 DEFB128Q7Z7B8 93 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 Q8N377 158 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CEP112Q8N8E3 955 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 OR4L1Q8NH43 312 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 URGCPQ8TCY9 931 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 NPRL2Q8WTW4 380 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 MRPL24Q96A35 216 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 NABP1Q96AH0 204 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 MRPL53Q96EL3 112 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CXorf58Q96LI9 332 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CEP19Q96LK0 163 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 RPRD1AQ96P16 312 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 TNFRSF13CQ96RJ3 184 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 GANQ9H2C0 597 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CXXC4Q9H2H0 198 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 PRO3102Q9H379 93 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 FAM124BQ9H5Z6 455 aaPredicted RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 C12orf4Q9NQ89 552 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 PIGVQ9NUD9 493 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 DDX28Q9NUL7 540 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 ACOXLQ9NUZ1 547 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 TAS2R7Q9NYW3 318 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 SENP1Q9P0U3 644 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 CTSZQ9UBR2 303 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 MRTO4Q9UKD2 239 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 TDRKHQ9Y2W6 561 aaKnown RBP4.21□□□□□ -1.74
FOXN3-206ENST00000554005 COL4A6Q14031 1691 aa4.21□□□□□ -1.74
FOXN3-206ENST00000554005 RALGAPA2Q2PPJ7 1873 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 TRBV5-4A0A0C4DH59 114 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 C1orf232A0A0U1RR37 186 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 HEATR9A2RTY3 570 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ZNF724A8MTY0 619 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 SPECC1L-ADORA2AF8WAN1 911 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 GOLGA8SH3BPF8 625 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 L7N2F9 121 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 PIRO00625 290 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 PI15O43692 258 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 KIAA0513O60268 411 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 PFDN1O60925 122 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OR6A2O95222 327 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 TXNDC12O95881 172 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OPN1MWP04001 364 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 FHP07954 510 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OPN1MW2P0DN77 364 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OPN1MW3P0DN78 364 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 AREGP15514 252 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 M6PRP20645 277 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OXTRP30559 389 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 HNRNPH3P31942 346 aaKnown RBP4.2□□□□□ -1.74
FOXN3-206ENST00000554005 CASP14P31944 242 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 CAPGP40121 348 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 IFNAR2P48551 515 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 HSPA13P48723 471 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ACADVLP49748 655 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 KLK7P49862 253 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 RPL27P61353 136 aaKnown RBP4.2□□□□□ -1.74
FOXN3-206ENST00000554005 HERV-K104P63124 156 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 SRPXP78539 464 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 S100A12P80511 92 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OTUD4Q01804 1114 aaKnown RBP4.2□□□□□ -1.74
FOXN3-206ENST00000554005 PAX8Q06710 450 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ENPP2Q13822 863 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ECSCRQ19T08 205 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ZNF699Q32M78 642 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 SNAI3Q3KNW1 292 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 FBXO48Q5FWF7 155 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ETFRF1Q6IPR1 90 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 RAB12Q6IQ22 244 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ZNF343Q6P1L6 599 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 PAQR6Q6TCH4 344 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ITIH5Q86UX2 942 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 SLC22A9Q8IVM8 553 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ZNF485Q8NCK3 441 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OR7G1Q8NGA0 311 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OR6M1Q8NGM8 313 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 OR8K3Q8NH51 312 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 ENKURQ8TC29 256 aa4.2□□□□□ -1.74
FOXN3-206ENST00000554005 AGR3Q8TD06 166 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms