RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SPC24Q8NBT2 197 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 KBTBD8Q8NFY9 601 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 OR2M3Q8NG83 312 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 OR5L2Q8NGL0 311 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 OR1J4Q8NGS1 313 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 FNDC9Q8TBE3 224 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 FAM45AQ8TCE6 357 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 AKAP1Q92667 903 aaKnown RBP eCLIP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 RIT1Q92963 219 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 PIGTQ969N2 578 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 MAGOHBQ96A72 148 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 LRRC45Q96CN5 670 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 OMA1Q96E52 524 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CNRIP1Q96F85 164 aaPredicted RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 PGM2Q96G03 612 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CFAP36Q96G28 342 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF479Q96JC4 524 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 UBXN10Q96LJ8 280 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF597Q96LX8 424 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 GPR78Q96P69 363 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 DGAT2Q96PD7 388 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 NAP1L3Q99457 506 aaPredicted RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 MTERF1Q99551 399 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 BAG1Q99933 345 aaPredicted RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 EGFL8Q99944 293 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 H2AFJQ9BTM1 129 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 SFXN3Q9BWM7 321 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 FRMD8P1Q9BZ68 369 aaPredicted RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 PLA2G12AQ9BZM1 189 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 FAM129AQ9BZQ8 928 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CCDC68Q9H2F9 335 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 DSN1Q9H410 356 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 DDX31Q9H8H2 851 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 RNF122Q9H9V4 155 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 YAE1D1Q9NRH1 226 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 FARSBQ9NSD9 589 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 DNAJC11Q9NVH1 559 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 LYARQ9NX58 379 aaKnown RBP2.78□□□□□ -1.96
SLIRP-202ENST00000553981 MED11Q9P086 117 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 MDFICQ9P1T7 246 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 ASIC3Q9UHC3 531 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 B3GALT5Q9Y2C3 310 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 RNF11Q9Y3C5 154 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 KCNE2Q9Y6J6 123 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 CADP27708 2225 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 JMJD1CQ15652 2540 aa2.78□□□□□ -1.96
SLIRP-202ENST00000553981 NSD1Q96L73 2696 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PRKDCP78527 4128 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 HIVEP2P31629 2446 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 IQANK1A0A1B0GTG1 560 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 A0A1W2PPL8 197 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 MAGEB16A2A368 324 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 OR2M5A3KFT3 312 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 URADA6NGE7 173 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF814B7Z6K7 855 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 H0Y3Z8 333 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 OR7A17O14581 309 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 RRHO14718 337 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 HS3ST1O14792 307 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TO15178 435 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ARHGEF9O43307 516 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 AKAP10O43572 662 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 RGS10O43665 173 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 OR10H2O60403 315 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 FADS1O60427 444 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 CCNT2O60583 730 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SNX4O95219 450 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 GOSR1O95249 250 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SIX3O95343 332 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ACTL6AO96019 429 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 NGFRP08138 427 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 IGFBP1P08833 259 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TPM1P09493 284 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 FAM58BPP0C7Q3 252 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SLC35E2BP0CK96 405 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SLC35E2P0CK97 266 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 IGHV4-31P0DP07 118 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PCNAP12004 261 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 CYP4B1P13584 511 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 POU2F1P14859 743 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 GNAZP19086 355 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PSMA4P25789 261 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SSTR1P30872 391 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SRD5A2P31213 254 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 IL2RGP31785 369 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 GALNSP34059 522 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 FEN1P39748 380 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PEX19P40855 299 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 CETN2P41208 172 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SSR2P43308 183 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PCYT1AP49585 367 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 RAE1P78406 368 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 IRF8Q02556 426 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 GALNT1Q10472 559 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TBL3Q12788 808 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 DDX39BQ13838 428 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 VEZF1Q14119 521 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 KPNB1Q14974 876 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PON3Q15166 354 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TOMM20Q15388 145 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms