RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 GCM2O75603 506 aaPredicted RBP11.34□□□□□ -0.59
LINC00643-202ENST00000553426 ADAP00813 363 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 FESP07332 822 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 CD3EP07766 207 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
LINC00643-202ENST00000553426 CHI3L1P36222 383 aaPredicted RBP11.34□□□□□ -0.59
LINC00643-202ENST00000553426 SLC1A6P48664 564 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 PTH2RP49190 550 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 KHKP50053 298 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 MERTKQ12866 999 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 SKP2Q13309 424 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 ITGADQ13349 1161 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 SSX8Q7RTT4 187 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 CROCCP2Q86T23 111 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 LRRC34Q8IZ02 419 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 GABRG1Q8N1C3 465 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 ZNF611Q8N823 705 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 ZNF563Q8TA94 476 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 MIPOL1Q8TD10 442 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 SLC25A43Q8WUT9 341 aaPredicted RBP11.34□□□□□ -0.59
LINC00643-202ENST00000553426 AKAP1Q92667 903 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00643-202ENST00000553426 ZHX1-C8orf76Q96EF9 292 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 ZNF350Q9GZX5 532 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 OR51I1Q9H343 314 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 BCO1Q9HAY6 547 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 KCNK9Q9NPC2 374 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 POLE3Q9NRF9 147 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 EMC3Q9P0I2 261 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 SLC35A3Q9Y2D2 325 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 WDR45Q9Y484 360 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 RNF115Q9Y4L5 304 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 DSCAMO60469 2012 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 NUP214P35658 2090 aaPredicted RBP11.34□□□□□ -0.59
LINC00643-202ENST00000553426 ABCA2Q9BZC7 2435 aa11.34□□□□□ -0.59
LINC00643-202ENST00000553426 IGHV3-15A0A0B4J1V0 119 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 SULT2B1O00204 365 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 ETV2O00321 342 aaPredicted RBP11.33□□□□□ -0.6
LINC00643-202ENST00000553426 FCMRO60667 390 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 UGT2B17O75795 530 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 GUSBP08236 651 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 OR12D1P0DN82 309 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 NID1P14543 1247 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 PAX1P15863 534 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 LBPP18428 481 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 FKBP2P26885 142 aaKnown RBP11.33□□□□□ -0.6
LINC00643-202ENST00000553426 S100A3P33764 101 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 APOBEC1P41238 236 aaKnown RBP11.33□□□□□ -0.6
LINC00643-202ENST00000553426 ANXA11P50995 505 aaKnown RBP11.33□□□□□ -0.6
LINC00643-202ENST00000553426 ATP5J2P56134 94 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 SESN3P58005 492 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 ZNF844Q08AG5 666 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 STX3Q13277 289 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 TAB1Q15750 504 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 HEPHL1Q6MZM0 1159 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 TMPPEQ6ZT21 453 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 Q6ZT83 130 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 BHLHA15Q7RTS1 189 aaPredicted RBP11.33□□□□□ -0.6
LINC00643-202ENST00000553426 GALNT5Q7Z7M9 940 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 ANKRD46Q86W74 232 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 ZNF100Q8IYN0 542 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 CLEC4FQ8N1N0 589 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 TRIML2Q8N7C3 387 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 TESCQ96BS2 214 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 MUCL1Q96DR8 90 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 PSD2Q9BQI7 771 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 TMEM204Q9BSN7 226 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 POTEKPQ9BYX7 375 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 MARCOQ9UEW3 520 aaPredicted RBP11.33□□□□□ -0.6
LINC00643-202ENST00000553426 LAMP3Q9UQV4 416 aa11.33□□□□□ -0.6
LINC00643-202ENST00000553426 ZNF724A8MTY0 619 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 KIAA0513O60268 411 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 CYTIPO60759 359 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 CNOT4O95628 575 aaKnown RBP11.32□□□□□ -0.6
LINC00643-202ENST00000553426 LY6G6DO95868 133 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 PLAUP00749 431 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 TFPIP10646 304 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 BGNP21810 368 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 RYKP34925 604 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 OR3A2P47893 321 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 DIO1P49895 249 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 CASP9P55211 416 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 RPS4XP62701 263 aaKnown RBP11.32□□□□□ -0.6
LINC00643-202ENST00000553426 LRRC74AQ0VAA2 488 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 TSC22D1Q15714 1073 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 GPAT3Q53EU6 434 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 SYT14P1Q58G82 188 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 ADAM5Q6NVV9 412 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 TNFAIP8L2Q6P589 184 aaPredicted RBP11.32□□□□□ -0.6
LINC00643-202ENST00000553426 ZNF619Q8N2I2 560 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 FBXW5Q969U6 566 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 GTPBP3Q969Y2 492 aaKnown RBP11.32□□□□□ -0.6
LINC00643-202ENST00000553426 ROPN1LQ96C74 230 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 NEURL3Q96EH8 262 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 TRMT61AQ96FX7 289 aaKnown RBP11.32□□□□□ -0.6
LINC00643-202ENST00000553426 PAIP2Q9BPZ3 127 aaKnown RBP11.32□□□□□ -0.6
LINC00643-202ENST00000553426 SLC35A5Q9BS91 424 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 NUF2Q9BZD4 464 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 QRSL1Q9H0R6 528 aaKnown RBP11.32□□□□□ -0.6
LINC00643-202ENST00000553426 SERHL2Q9H4I8 314 aa11.32□□□□□ -0.6
LINC00643-202ENST00000553426 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms