RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ULK2Q8IYT8 1036 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 GHDCQ8N2G8 530 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 LSMEM1Q8N8F7 131 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 OR14L1PQ8NHC6 308 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 RASSF5Q8WWW0 418 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 MRGPRX4Q96LA9 322 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 RNF145Q96MT1 663 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 TIMP4Q99727 224 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 EVA1AQ9H8M9 152 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 TNFRSF10DQ9UBN6 386 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 RPH3AQ9Y2J0 694 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNF337Q9Y3M9 751 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 HIVEP3Q5T1R4 2406 aa13.41□□□□□ -0.26
MTHFD1-204ENST00000553405 OR14I1A6ND48 311 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 GSTA4O15217 222 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 FMO6PO60774 539 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 IFNA14P01570 189 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 THY1P04216 161 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNF708P17019 499 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 TCEA1P23193 301 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 EIF1P41567 113 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 SLC1A3P43003 542 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 IDH2P48735 452 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 ZNF41P51814 821 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 ARHGAP11AQ6P4F7 1023 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 CCDC121Q6ZUS5 278 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 PLEKHM3Q6ZWE6 761 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 PRICKLE2Q7Z3G6 844 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 YTHDF3Q7Z739 585 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 GGNQ86UU5 652 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 EID3Q8N140 333 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 GALNT11Q8NCW6 608 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 C3orf49Q96BT1 292 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 ASB9Q96DX5 294 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 HSH2DQ96JZ2 352 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 PRDM14Q9GZV8 571 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 MUC13Q9H3R2 512 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 ARMC7Q9H6L4 198 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 TESQ9UGI8 421 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 SLC7A8Q9UHI5 535 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 BAG5Q9UL15 447 aa13.4□□□□□ -0.26
MTHFD1-204ENST00000553405 TENM4Q6N022 2769 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 A0A0B4J2E0 115 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 A0A1B0GX12 115 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 NUDT14O95848 222 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 ACTL6AO96019 429 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 FUT4P22083 530 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 ELK4P28324 431 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 SHC1P29353 583 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 RASSF2P50749 326 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 RGS8P57771 180 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 MRPL49Q13405 166 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 TOMM20Q15388 145 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 CTU2Q2VPK5 515 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 RAET1LQ5VY80 246 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 ENPP6Q6UWR7 440 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 GFRALQ6UXV0 394 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 GRINAQ7Z429 371 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 ATG4DQ86TL0 474 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 CARM1Q86X55 608 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 ADGRG3Q86Y34 549 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 FAM162AQ96A26 154 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 CCDC124Q96CT7 223 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 DTNBP1Q96EV8 351 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 WDYHV1Q96HA8 205 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 ADGRG7Q96K78 797 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 C7orf34Q96L11 122 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 SFXN2Q96NB2 322 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 PIGQQ9BRB3 760 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 CACYBPQ9HB71 228 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 OSGIN1Q9UJX0 560 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 POMPQ9Y244 141 aa13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 USP9XQ93008 2570 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-204ENST00000553405 A0A1B0GWA3 101 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 LINC01387J3KSC0 135 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 PRKD3O94806 890 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 PRSS23O95084 383 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 CPN1P15169 458 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 OR1E2P47887 323 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 STARP49675 285 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 SUCLG1P53597 346 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 CLDN20P56880 219 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 TRAP1Q12931 704 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 BCL2A1Q16548 175 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 WBP2NLQ6ICG8 309 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 CYP2R1Q6VVX0 501 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 ADGRE4PQ86SQ3 457 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 SLC26A7Q8TE54 656 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 ABTB1Q969K4 478 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 NSMCE2Q96MF7 247 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 TRIM2Q9C040 744 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 AMBRA1Q9C0C7 1298 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 CTPS2Q9NRF8 586 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 ADPRHL2Q9NX46 363 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 KLHL28Q9NXS3 571 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 SH3GLB1Q9Y371 365 aa13.38□□□□□ -0.27
MTHFD1-204ENST00000553405 NPIPA2E9PIF3 369 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 NPIPA3F8WFD2 350 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 H0YC42 278 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 FFAR1O14842 300 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms