RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 NPTNQ9Y639 398 aa3.93□□□□□ -1.78
SCFD1-209ENST00000553280 ANKRD30BQ9BXX2 1392 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 LOC100131303A0A0U1RQF7 123 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 KRTAP16-1A8MUX0 517 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 E9PBE3 544 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 K7ENP7 123 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 LATO43561 262 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 CABYRO75952 493 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 CCDC130P13994 396 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 BCL3P20749 454 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 IGHV1-2P23083 117 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 NMT1P30419 496 aaKnown RBP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 EPS15P42566 896 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 DUSP3P51452 185 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 HNRNPA3P51991 378 aaKnown RBP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 SUCLG1P53597 346 aaKnown RBP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 HSPA2P54652 639 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 MRPS11P82912 194 aaKnown RBP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 PAX2Q02962 417 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 IMMTQ16891 758 aaKnown RBP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 C6orf226Q5I0X4 101 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 UFSP1Q6NVU6 142 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 GSG1LQ6UXU4 331 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 SLC35F2Q8IXU6 374 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 MCOLN2Q8IZK6 566 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 BBS5Q8N3I7 341 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 CATSPER1Q8NEC5 780 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 FAM83FQ8NEG4 500 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 OR1L4Q8NGR5 311 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 MRPS31Q92665 395 aaKnown RBP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 FAF2Q96CS3 445 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 SOSTQ9BQB4 213 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 CHRDL1Q9BU40 450 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 TSSK1BQ9BXA7 367 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF385DQ9H6B1 395 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.92□□□□□ -1.78
SCFD1-209ENST00000553280 CLEC5AQ9NY25 188 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 B3GNT2Q9NY97 397 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 SPATA7Q9P0W8 599 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 SPRR3Q9UBC9 169 aa3.92□□□□□ -1.78
SCFD1-209ENST00000553280 E7ESA3 106 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 POLR2DO15514 142 aaKnown RBP3.91□□□□□ -1.78
SCFD1-209ENST00000553280 CXCL13O43927 109 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 PRKYO43930 277 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF253O75346 499 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 GPX5O75715 221 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 CLDN9O95484 217 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 GCAP28676 217 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 GNA11P29992 359 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 MAP3K8P41279 467 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 XCR1P46094 333 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 STARP49675 285 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 PRKXP51817 358 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 ATP1B3P54709 279 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 OGDHQ02218 1023 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 CUL1Q13616 776 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 LIPNQ5VXI9 398 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 TGIF2LXQ8IUE1 241 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 MTURNQ8N3F0 131 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 ALLCQ8N6M5 410 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 TCTEX1D2Q8WW35 142 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 TOMM40LQ969M1 308 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 UBE2E3Q969T4 207 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 DPH7Q9BTV6 452 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 RAB34Q9BZG1 259 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 YY1AP1Q9H869 796 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 POPDC2Q9HBU9 364 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 ZFP14Q9HCL3 533 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 DPM3Q9P2X0 92 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 RABL2AQ9UBK7 228 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-209ENST00000553280 IFT52Q9Y366 437 aa3.91□□□□□ -1.78
SCFD1-209ENST00000553280 SULT2B1O00204 365 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 PI15O43692 258 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 RAMP3O60896 148 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 DIRAS1O95057 198 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 AP2A1O95782 977 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 GNA14O95837 355 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 CCNCP24863 283 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 YWHABP31946 246 aaKnown RBP3.9□□□□□ -1.79
SCFD1-209ENST00000553280 CCR1P32246 355 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 RPL29P47914 159 aaKnown RBP3.9□□□□□ -1.79
SCFD1-209ENST00000553280 DAP3P51398 398 aaKnown RBP3.9□□□□□ -1.79
SCFD1-209ENST00000553280 RPL32P62910 135 aaKnown RBP3.9□□□□□ -1.79
SCFD1-209ENST00000553280 GBE1Q04446 702 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 FCN2Q15485 313 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 TRIM16LQ309B1 348 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 GLYR1Q49A26 553 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-209ENST00000553280 H2BFWTQ7Z2G1 175 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 TTC5Q8N0Z6 440 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 SVOPLQ8N434 492 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 ATP6V0D2Q8N8Y2 350 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 CCDC26Q8TAB7 109 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 MAGEE2Q8TD90 523 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-209ENST00000553280 TCEANC2Q96MN5 208 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 IL4I1Q96RQ9 567 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 MCHR1Q99705 422 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 NANSQ9NR45 359 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 CUTCQ9NTM9 273 aa3.9□□□□□ -1.79
SCFD1-209ENST00000553280 WARS2Q9UGM6 360 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms