RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 ERV3-1Q14264 604 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PRICKLE4Q2TBC4 344 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 DCAF12Q5T6F0 453 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 TYW3Q6IPR3 259 aaKnown RBP17.23■□□□□ 0.35
LRP1-204ENST00000553277 FAM111BQ6SJ93 734 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 SLC16A11Q8NCK7 471 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PLPP5Q8NEB5 264 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 ZG16BQ96DA0 208 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 TAAR9Q96RI9 348 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 MCHR1Q99705 422 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PLA2G12AQ9BZM1 189 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 ZNF350Q9GZX5 532 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 QRSL1Q9H0R6 528 aaKnown RBP17.23■□□□□ 0.35
LRP1-204ENST00000553277 POLE3Q9NRF9 147 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 DUSP22Q9NRW4 184 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 WDR45Q9Y484 360 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PCDHGB6Q9Y5F9 930 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PLD2O14939 933 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 HMGN1P05114 100 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 CYC1P08574 325 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PTGER1P34995 402 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 ETV5P41161 510 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 MTNR1AP48039 350 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 DEFA1P59665 94 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 DEFA3P59666 94 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 EEF1A1P68104 462 aaKnown RBP17.23■□□□□ 0.35
LRP1-204ENST00000553277 STEAP3Q658P3 488 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PLEKHM3Q6ZWE6 761 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 GDF7Q7Z4P5 450 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 RNF113BQ8IZP6 322 aaKnown RBP17.23■□□□□ 0.35
LRP1-204ENST00000553277 ANKK1Q8NFD2 765 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PMEPA1Q969W9 287 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 SLC41A3Q96GZ6 507 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 PELOQ9BRX2 385 aaKnown RBP17.23■□□□□ 0.35
LRP1-204ENST00000553277 ABCB10Q9NRK6 738 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 C14orf105Q9NVL8 296 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 B3GALT1Q9Y5Z6 326 aa17.23■□□□□ 0.35
LRP1-204ENST00000553277 CPSF4LA6NMK7 179 aaKnown RBP17.22■□□□□ 0.35
LRP1-204ENST00000553277 SLC30A4O14863 429 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 FCMRO60667 390 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 DBIP07108 87 aaKnown RBP17.22■□□□□ 0.35
LRP1-204ENST00000553277 ZNF28P17035 718 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 TRHRP34981 398 aaPredicted RBP17.22■□□□□ 0.35
LRP1-204ENST00000553277 SOX3P41225 446 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 ID2Q02363 134 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 ACSM1Q08AH1 577 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 STX4Q12846 297 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 DNASE1L3Q13609 305 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 VWA2Q5GFL6 755 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 MRPL14Q6P1L8 145 aaKnown RBP17.22■□□□□ 0.35
LRP1-204ENST00000553277 TMPRSS12Q86WS5 348 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 SNX29P2Q8IUI4 249 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 CADM3Q8N126 398 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 CLIP4Q8N3C7 705 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 CDRT4Q8N9R6 151 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 ZBTB8BQ8NAP8 495 aaPredicted RBP17.22■□□□□ 0.35
LRP1-204ENST00000553277 POGLUT1Q8NBL1 392 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 OR8D4Q8NGM9 314 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 CDS1Q92903 461 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 RNFT2Q96EX2 444 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 ZNF578Q96N58 590 aaPredicted RBP17.22■□□□□ 0.35
LRP1-204ENST00000553277 SDF2Q99470 211 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 COQ7Q99807 217 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 SLC30A2Q9BRI3 323 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 CNPPD1Q9BV87 410 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 RBCK1Q9BYM8 510 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 EGLN3Q9H6Z9 239 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 SMURF1Q9HCE7 757 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 QPCTLQ9NXS2 382 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 MAT2BQ9NZL9 334 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 CTSFQ9UBX1 484 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 CDH10Q9Y6N8 788 aa17.22■□□□□ 0.35
LRP1-204ENST00000553277 SPAARA0A1B0GVQ0 90 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 TCRBV16S1A1N1A0A5B0 115 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 AGRPO00253 132 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 TBX1O43435 398 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 CDC123O75794 336 aaPredicted RBP17.21■□□□□ 0.35
LRP1-204ENST00000553277 IMPDH2P12268 514 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 MAOAP21397 527 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 S1PR1P21453 382 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 RPS19P39019 145 aaKnown RBP17.21■□□□□ 0.35
LRP1-204ENST00000553277 ETV1P50549 477 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 EFNA3P52797 238 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 CLDN6P56747 220 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 LSM11P83369 360 aaKnown RBP eCLIP17.21■□□□□ 0.35
LRP1-204ENST00000553277 AADACL4Q5VUY2 407 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 BCDIN3DQ7Z5W3 292 aaKnown RBP17.21■□□□□ 0.35
LRP1-204ENST00000553277 LAPTM4BQ86VI4 370 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 RANBP3LQ86VV4 465 aaPredicted RBP17.21■□□□□ 0.35
LRP1-204ENST00000553277 ZNF619Q8N2I2 560 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 STT3BQ8TCJ2 826 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 CHAC2Q8WUX2 184 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 HOXB13Q92826 284 aaPredicted RBP17.21■□□□□ 0.35
LRP1-204ENST00000553277 RBM18Q96H35 190 aaKnown RBP17.21■□□□□ 0.35
LRP1-204ENST00000553277 VN1R1Q9GZP7 353 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 WDR54Q9H977 334 aa17.21■□□□□ 0.35
LRP1-204ENST00000553277 EXOGQ9Y2C4 368 aaKnown RBP17.21■□□□□ 0.35
LRP1-204ENST00000553277 SURF4O15260 269 aa17.2■□□□□ 0.34
LRP1-204ENST00000553277 STX11O75558 287 aa17.2■□□□□ 0.34
LRP1-204ENST00000553277 ZGLP1P0C6A0 271 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms