RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 NGFRP08138 427 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 ZGLP1P0C6A0 271 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 GKN3PP0CG01 181 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 PRR23D2P0DMB1 279 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 CT45A8P0DMV1 189 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 CT45A9P0DMV2 189 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SAGP10523 405 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 CKMT1AP12532 417 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 PEPDP12955 493 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 PRG2P13727 222 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 HK1P19367 917 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 MAKP20794 623 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 TGM1P22735 817 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 PTBP1P26599 531 aaKnown RBP eCLIP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 CD1CP29017 333 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 RORAP35398 523 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SOX3P41225 446 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 PPICP45877 212 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SLC6A8P48029 635 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 ARL4DP49703 201 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 RNF144AP50876 292 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 GFERP55789 205 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 FXYD6P3P58550 94 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 DEFA1P59665 94 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 DEFA3P59666 94 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 MLLT1Q03111 559 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 FOXD4Q12950 439 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SQSTM1Q13501 440 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 ZNF267Q14586 743 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 ELAVL1Q15717 326 aaKnown RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 KLHL26Q53HC5 615 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 CT45A2Q5DJT8 189 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 ALG10BQ5I7T1 473 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 LCN1P1Q5VSP4 162 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 LIPKQ5VXJ0 399 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 HSDL2Q6YN16 418 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 WDR88Q6ZMY6 472 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 DGAT2L6Q6ZPD8 337 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 MEPCEQ7L2J0 689 aaKnown RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 OAFQ86UD1 273 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 FRMD1Q8N878 549 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 BCORP1Q8N888 145 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 RCBTB1Q8NDN9 531 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 C17orf47Q8NEP4 570 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 OR4C6Q8NH72 309 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 OR14A16Q8NHC5 309 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 PFN4Q8NHR9 129 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 C16orf52Q8NHV5 167 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SETD6Q8TBK2 473 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 LIPHQ8WWY8 451 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 CNOT9Q92600 299 aaKnown RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 DAZLQ92904 295 aaKnown RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 KIAA1143Q96AT1 154 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 CEP19Q96LK0 163 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 GPX7Q96SL4 187 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 DPYSL5Q9BPU6 564 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SLC30A2Q9BRI3 323 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 TMEM43Q9BTV4 400 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 CNPPD1Q9BV87 410 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 DUSP23Q9BVJ7 150 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 KCNN2Q9H2S1 579 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SMURF1Q9HCE7 757 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 EXOSC4Q9NPD3 245 aaKnown RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 HINT3Q9NQE9 182 aaKnown RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 UBQLN4Q9NRR5 601 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 FBXO34Q9NWN3 711 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 IRAK4Q9NWZ3 460 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 TXNL4BQ9NX01 149 aaKnown RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 ERVK13-1Q9NX77 482 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 LRIT1Q9P2V4 623 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 TNFRSF10DQ9UBN6 386 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 DAPK2Q9UIK4 370 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SERTAD3Q9UJW9 196 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 ICAM5Q9UMF0 924 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SRPK3Q9UPE1 567 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 ERVK-19Q9WJR5 959 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 NTNG1Q9Y2I2 539 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SLC6A5Q9Y345 797 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SF3B6Q9Y3B4 125 aaKnown RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 OR10H1Q9Y4A9 318 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 SPIN1Q9Y657 262 aaPredicted RBP6.28□□□□□ -1.4
CCDC59-206ENST00000552412 RNF215Q9Y6U7 377 aa6.28□□□□□ -1.4
CCDC59-206ENST00000552412 NPIPA5A0A0B4J1W7 369 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 A0A1B0GX78 115 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 A0A1W2PQD3 144 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 TCRBV16S1A1N1A0A5B0 115 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 FUOMA2VDF0 154 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 FIGNL2A6NMB9 653 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 C17orf105B2RV13 164 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 NPIPA7E9PJI5 369 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 ARPC3O15145 178 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 NDUFB2O95178 105 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 CSTAP01040 98 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 CLPSP04118 112 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 IGKV3-11P04433 115 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 IFNA16P05015 189 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 CD1AP06126 327 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 CTSBP07858 339 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 CYC1P08574 325 aa6.27□□□□□ -1.41
CCDC59-206ENST00000552412 ANKRD34CP0C6C1 535 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms