RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 IL36GQ9NZH8 169 aa3.59□□□□□ -1.83
SCAF11-210ENST00000547654 PDP1Q9P0J1 537 aaPredicted RBP3.59□□□□□ -1.83
SCAF11-210ENST00000547654 PRPF19Q9UMS4 504 aaKnown RBP3.59□□□□□ -1.83
SCAF11-210ENST00000547654 PACSIN2Q9UNF0 486 aaPredicted RBP3.59□□□□□ -1.83
SCAF11-210ENST00000547654 POLDIP2Q9Y2S7 368 aa3.59□□□□□ -1.83
SCAF11-210ENST00000547654 GRIN2DO15399 1336 aa3.59□□□□□ -1.83
SCAF11-210ENST00000547654 CFAP65Q6ZU64 1925 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 A0A1W2PR80 420 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 OR6C65A6NJZ3 312 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ACOD1A6NK06 481 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 C11orf98E9PRG8 122 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 F5H6K3 240 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 PDLIM1O00151 329 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 TM9SF1O15321 606 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 NVLO15381 856 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 TAPBPO15533 448 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 AKR7A2O43488 359 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ZG16O60844 167 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 H6PDO95479 791 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 TBX6O95947 436 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 F10P00742 488 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 CA1P00915 261 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 OAS1P00973 400 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 CST1P01037 141 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ATP1B2P14415 290 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 MYOGP15173 224 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 CD1DP15813 335 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 PRKACAP17612 351 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ANOS1P23352 680 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 CD1BP29016 333 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 TIMP3P35625 211 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 DCTP40126 519 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 LEPRP48357 1165 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 SLC11A1P49279 550 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 CLDN8P56748 225 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ERVK11-1P61568 191 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 RPS27AP62979 156 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 CSNK2BP67870 215 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 DHODHQ02127 395 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 PLOD1Q02809 727 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 KLRC3Q07444 240 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 MAB21L1Q13394 359 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ITPK1Q13572 414 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 FASTKQ14296 549 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 TEAD2Q15562 447 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 CHRNA6Q15825 494 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 STK11Q15831 433 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 KNOP1Q1ED39 458 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 MICBQ29980 383 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 KLHL38Q2WGJ6 581 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 KIAA1644Q3SXP7 199 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 WLSQ5T9L3 541 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 PLCXD3Q63HM9 321 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 OR8G2PQ6IF36 304 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 UQCC3Q6UW78 93 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 SSX9Q7RTT3 188 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 VTCN1Q7Z7D3 282 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 SERPINA9Q86WD7 417 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 DRAXINQ8NBI3 349 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 PCNPQ8WW12 178 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ELMO1Q92556 727 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 SGK3Q96BR1 496 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 C19orf60Q96EN9 201 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 TIMD4Q96H15 378 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ALKBH3Q96Q83 286 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 IL4I1Q96RQ9 567 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 OVOL2Q9BRP0 275 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 TMEM121Q9BTD3 319 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 C20orf24Q9BUV8 137 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ILKAPQ9H0C8 392 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 SLITRK2Q9H156 845 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 NARFLQ9H6Q4 476 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 SUDS3Q9H7L9 328 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ELL3Q9HB65 397 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ESM1Q9NQ30 184 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ZDHHC18Q9NUE0 388 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 BFARQ9NZS9 450 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 RCOR3Q9P2K3 495 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 ZMAT5Q9UDW3 170 aaKnown RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 PITPNC1Q9UKF7 332 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 RASD1Q9Y272 281 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 PHLPP2Q6ZVD8 1323 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 RPAP1Q9BWH6 1393 aaPredicted RBP3.58□□□□□ -1.84
SCAF11-210ENST00000547654 PTPN23Q9H3S7 1636 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 COL24A1Q17RW2 1714 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 NRAPQ86VF7 1730 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 NWD2Q9ULI1 1742 aa3.58□□□□□ -1.84
SCAF11-210ENST00000547654 IGHV4-4A0A075B6R2 117 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ZNF840PA6NDX5 716 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 RNF212BA8MTL3 300 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ZNF724A8MTY0 619 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.57□□□□□ -1.84
SCAF11-210ENST00000547654 NDUFS8O00217 210 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 PIK3C2BO00750 1634 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 FBP2O00757 339 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 CHMP2AO43633 222 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 EFNA2O43921 213 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 MAGEC1O60732 1142 aa3.57□□□□□ -1.84
SCAF11-210ENST00000547654 CSTAP01040 98 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms