RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 FAM71CQ8NEG0 241 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 MARK4Q96L34 752 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 SRXN1Q9BYN0 137 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 OR10A4Q9H209 315 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 COQ10BQ9H8M1 238 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 C6orf203Q9P0P8 240 aaPredicted RBP16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 LIPT1Q9Y234 373 aa16.64■□□□□ 0.25
CHMP1A-203ENST00000547614 HMGN4O00479 90 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 KLF11O14901 512 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 CYP7B1O75881 506 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 IL6P05231 212 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 UBTFL6P0CB48 400 aaPredicted RBP16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 KITP10721 976 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 CD99P14209 185 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 CD53P19397 219 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 SESN3P58005 492 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 TMEM201Q5SNT2 666 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 FCRLAQ7L513 359 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 ZNF550Q7Z398 422 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 ATP6V1C2Q8NEY4 427 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 ABHD3Q8WU67 409 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 PMM1Q92871 262 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 TRNT1Q96Q11 434 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 TACO1Q9BSH4 297 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 SERINC1Q9NRX5 453 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 ACER3Q9NUN7 267 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 KLHL13Q9P2N7 655 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 GPR52Q9Y2T5 361 aa16.63■□□□□ 0.25
CHMP1A-203ENST00000547614 PRAMEF27A3QJZ7 478 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 YES1P07947 543 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 PSMB1P20618 241 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 MAGEA8P43361 318 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 PPP2R2AP63151 447 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 KCNJ10P78508 379 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 HPCAP84074 193 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 PDCD4Q53EL6 469 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 GPAT3Q53EU6 434 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 ANKRD34AQ69YU3 496 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 NXNQ6DKJ4 435 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 ZNF621Q6ZSS3 439 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 C22orf34Q6ZV56 151 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 RNF130Q86XS8 419 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 PIWIL2Q8TC59 973 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 SLC25A43Q8WUT9 341 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 ZG16BQ96DA0 208 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 PIK3IP1Q96FE7 263 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 INPP5KQ9BT40 448 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 HDHD5Q9BXW7 423 aa16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 EXOSC3Q9NQT5 275 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 BEX4Q9NWD9 120 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-203ENST00000547614 C9JVG2 144 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 SLC22A3O75751 556 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 H6PDO95479 791 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 KLK2P20151 261 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 ENPP1P22413 925 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 FKBP2P26885 142 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 APOBEC1P41238 236 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 CHRNEQ04844 493 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 MERTKQ12866 999 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 GSTA3Q16772 222 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 LRRC74BQ6ZQY2 392 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 PLEKHM3Q6ZWE6 761 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 TUSC5Q8IXB3 177 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 CMIPQ8IY22 773 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 ZNF75CPQ92670 426 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 ZC3HAV1LQ96H79 300 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 QRSL1Q9H0R6 528 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 C12orf49Q9H741 205 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 MTHFD2LQ9H903 347 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 BCO1Q9HAY6 547 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 SDR39U1Q9NRG7 319 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 ZIM2Q9NZV7 527 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 KLHL9Q9P2J3 617 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 C2CD3Q4AC94 2353 aa16.61■□□□□ 0.25
CHMP1A-203ENST00000547614 A0A1W2PNR3 127 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 RFXANKO14593 260 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 KRT75O95678 551 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 C1QCP02747 245 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 THBDP07204 575 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 CDKN2CP42773 168 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 ADAM8P78325 824 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 SLC9B1Q4ZJI4 515 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 AGBL2Q5U5Z8 902 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 TMPPEQ6ZT21 453 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 NUFIP2Q7Z417 695 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 OR5B2Q96R09 309 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 SLC38A1Q9H2H9 487 aa16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 SPIN1Q9Y657 262 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-203ENST00000547614 AGAP5A6NIR3 686 aa16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 UBDO15205 165 aa16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 KLF4O43474 513 aa16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 GSNP06396 782 aa16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 ZCCHC18P0CG32 403 aa16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 FPR1P21462 350 aa16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 LOXP28300 417 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 HOXC12P31275 282 aa16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 CSNK2A1P68400 391 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 SYPL1Q16563 259 aa16.59■□□□□ 0.25
CHMP1A-203ENST00000547614 SYT14P1Q58G82 188 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms