RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 DVL2O14641 736 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 SRPX2O60687 465 aaPredicted RBP14.31□□□□□ -0.12
BRF1-212ENST00000547562 CTNSO60931 367 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 ZNF3P17036 446 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 MAZP56270 477 aaKnown RBP14.31□□□□□ -0.12
BRF1-212ENST00000547562 SKP1P63208 163 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 IGLV3-21P80748 117 aaPredicted RBP14.31□□□□□ -0.12
BRF1-212ENST00000547562 FHL1Q13642 323 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 FAM53BQ14153 422 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 CRMP1Q14194 572 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 NPSR1Q6W5P4 371 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 TNFRSF13CQ96RJ3 184 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 HOXD1Q9GZZ0 328 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 C11orf54Q9H0W9 315 aaPredicted RBP14.31□□□□□ -0.12
BRF1-212ENST00000547562 HRO43593 1189 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 MRPL3P09001 348 aaKnown RBP14.31□□□□□ -0.12
BRF1-212ENST00000547562 SBK2P0C263 348 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 CLUP10909 449 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 PEPDP12955 493 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 HK1P19367 917 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 APEX1P27695 318 aaKnown RBP14.31□□□□□ -0.12
BRF1-212ENST00000547562 MADCAM1Q13477 382 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 FGFBP1Q14512 234 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 ZNF141Q15928 474 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 MZT2AQ6P582 158 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 METAP1DQ6UB28 335 aaPredicted RBP14.31□□□□□ -0.12
BRF1-212ENST00000547562 LINC00114Q6XXX2 140 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 ZNF595Q8IYB9 648 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 CYB561A3Q8NBI2 242 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 RCBTB1Q8NDN9 531 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 OR5W2Q8NH69 310 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 SLC35B4Q969S0 331 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 ORAI3Q9BRQ5 295 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 NDC1Q9BTX1 674 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 PPP1R3EQ9H7J1 279 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 ADGRL4Q9HBW9 690 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 MCCC2Q9HCC0 563 aa14.31□□□□□ -0.12
BRF1-212ENST00000547562 BLACEA4D250 179 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 NPIPB9F8W1W9 429 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 MT-ND5P03915 603 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 SLC6A6P31641 620 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 MTNR1BP49286 362 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 EVX1P49640 407 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 MAT1AQ00266 395 aaKnown RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 CRYZQ08257 329 aaKnown RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 ZNF267Q14586 743 aaPredicted RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 ZNF550Q7Z398 422 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 GPALPP1Q8IXQ4 340 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 SLC43A2Q8N370 569 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 NLGN4YQ8NFZ3 816 aaPredicted RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 SENP5Q96HI0 755 aaPredicted RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 AHCYL2Q96HN2 611 aaKnown RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 SPACA7Q96KW9 195 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 MAP3K3Q99759 626 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 PRTFDC1Q9NRG1 225 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 FBXL4Q9UKA2 621 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 CLDN16Q9Y5I7 305 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 PRAMEF2O60811 474 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 NUDT1P36639 197 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 BTG2P78543 158 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 CSTF1Q05048 431 aaKnown RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 ERV3-1Q14264 604 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 ZSWIM7Q19AV6 140 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 RSBN1Q5VWQ0 802 aaPredicted RBP14.3□□□□□ -0.12
BRF1-212ENST00000547562 ARHGAP11AQ6P4F7 1023 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 ULK3Q6PHR2 472 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 CADM2Q8N3J6 435 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 OR6F1Q8NGZ6 308 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 TCTN2Q96GX1 697 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 DGAT2Q96PD7 388 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 G6PC3Q9BUM1 346 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 MMP28Q9H239 520 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 Q9N2J8 555 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 HAO2Q9NYQ3 351 aa14.3□□□□□ -0.12
BRF1-212ENST00000547562 CACNA1IQ9P0X4 2223 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 A8MU76 341 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 CLDN4O14493 209 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 PLA2G10O15496 165 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 HLA-DQB1P01920 261 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 CD53P19397 219 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 F8A1P23610 371 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 PTBP1P26599 531 aaKnown RBP eCLIP14.29□□□□□ -0.12
BRF1-212ENST00000547562 GPR3P46089 330 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 CAPZBP47756 277 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.29□□□□□ -0.12
BRF1-212ENST00000547562 KIRREL2Q6UWL6 708 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 Q8N402 240 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 SLC2A12Q8TD20 617 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 ADAMTS18Q8TE60 1221 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 DEPDC7Q96QD5 511 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 ZMIZ1Q9ULJ6 1067 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.29□□□□□ -0.12
BRF1-212ENST00000547562 MEIOCA2RUB1 952 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 OR2W5A6NFC9 320 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 E9PI62 339 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 TFECO14948 347 aaPredicted RBP14.29□□□□□ -0.12
BRF1-212ENST00000547562 PLPP2O43688 288 aa14.29□□□□□ -0.12
BRF1-212ENST00000547562 NSA2O95478 260 aaKnown RBP14.29□□□□□ -0.12
BRF1-212ENST00000547562 IFNGP01579 166 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms