RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 LANCL3Q6ZV70 420 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 S100ZQ8WXG8 99 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 TCTN2Q96GX1 697 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 DUSP22Q9NRW4 184 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 CDH10Q9Y6N8 788 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 C11orf98E9PRG8 122 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 SURF4O15260 269 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 HCRTR2O43614 444 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 CTNSO60931 367 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 PLGP00747 810 aaPredicted RBP11.73□□□□□ -0.53
SCAF11-209ENST00000547018 LIMS3P0CW19 117 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 LIMS4P0CW20 117 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 TNFSF8P32971 234 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 SLC1A3P43003 542 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 DECR1Q16698 335 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 FAM131AQ6UXB0 335 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 OR13C5Q8NGS8 318 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 BARHL1Q9BZE3 327 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 TXNL4BQ9NX01 149 aaKnown RBP11.73□□□□□ -0.53
SCAF11-209ENST00000547018 RBMX2Q9Y388 322 aaKnown RBP11.73□□□□□ -0.53
SCAF11-209ENST00000547018 PCDHGA3Q9Y5H0 932 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 ARID1AO14497 2285 aa11.73□□□□□ -0.53
SCAF11-209ENST00000547018 KIF26BQ2KJY2 2108 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 FAM86C2PA6NEL3 165 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 AHCYP23526 432 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 PYCR1P32322 319 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CXCL12P48061 93 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 PLAURQ03405 335 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 IRF3Q14653 427 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 TP53I3Q53FA7 332 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 HLA-DQA1Q5Y7H0 255 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 SLC37A3Q8NCC5 494 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 PROKR2Q8NFJ6 384 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 ZNF764Q96H86 408 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CTRCQ99895 268 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 NDC1Q9BTX1 674 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 MMP27Q9H306 513 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 TRPV5Q9NQA5 729 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CTSFQ9UBX1 484 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CBLCQ9ULV8 474 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 A0A1W2PRG6 482 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 RIIAD1A6NNX1 92 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 A8MV72 311 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-209ENST00000547018 SLC30A4O14863 429 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 TMCC2O75069 709 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CT45A8P0DMV1 189 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CT45A9P0DMV2 189 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 SPNP16150 400 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 FPR3P25089 353 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 FOXK2Q01167 660 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 FABP5Q01469 135 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CEBPEQ15744 281 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CT45A2Q5DJT8 189 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 SLC25A45Q8N413 288 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 RFLNBQ8N5W9 214 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 CLDN22Q8N7P3 220 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 BCORP1Q8N888 145 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 UFD1Q92890 307 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 RASD2Q96D21 266 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 PRRG3Q9BZD7 231 aa11.72□□□□□ -0.53
SCAF11-209ENST00000547018 SRA1Q9HD15 236 aaKnown RBP11.72□□□□□ -0.53
SCAF11-209ENST00000547018 MRPS7Q9Y2R9 242 aaKnown RBP11.72□□□□□ -0.53
SCAF11-209ENST00000547018 ARRDC5A6NEK1 342 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 E9PI62 339 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 ZNF749O43361 778 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 RPP14O95059 124 aaKnown RBP11.71□□□□□ -0.53
SCAF11-209ENST00000547018 PSMB10P40306 273 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 STAT5AP42229 794 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 CRYBB2P43320 205 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 MAGEB1P43366 347 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 SLC15A1P46059 708 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 NKX2-5P52952 324 aaPredicted RBP11.71□□□□□ -0.53
SCAF11-209ENST00000547018 FXYD6P3P58550 94 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 CD226Q15762 336 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 C14orf28Q4W4Y0 310 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 TMPRSS11AQ6ZMR5 421 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 RFKQ969G6 155 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 ZDHHC12Q96GR4 267 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 NMNAT3Q96T66 252 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 SMOC1Q9H4F8 434 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 KRCC1Q9NPI7 259 aaPredicted RBP11.71□□□□□ -0.53
SCAF11-209ENST00000547018 FGF21Q9NSA1 209 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 FAIMQ9NVQ4 179 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 IL20Q9NYY1 176 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 GTF2A1LQ9UNN4 478 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 CFL2Q9Y281 166 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 SVILO95425 2214 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 A0A1W2PQL4 384 aaPredicted RBP11.71□□□□□ -0.53
SCAF11-209ENST00000547018 ZNF12P17014 697 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 EIF2B2P49770 351 aaKnown RBP11.71□□□□□ -0.53
SCAF11-209ENST00000547018 BCAP31P51572 246 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 TUBA1BP68363 451 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 GRM7Q14831 915 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 MEDAGQ5VYS4 303 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 TUBA1AQ71U36 451 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 KDM8Q8N371 416 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 OR1L3Q8NH93 324 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 SMURF1Q9HCE7 757 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 STUB1Q9UNE7 303 aa11.71□□□□□ -0.53
SCAF11-209ENST00000547018 ANKRD61A6NGH8 418 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms