RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 OR2T33Q8NG76 320 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OR52B6Q8NGF0 335 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OR51G2Q8NGK0 314 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OR5L1Q8NGL2 311 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OR14A16Q8NHC5 309 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 RHOXF1Q8NHV9 184 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 FUBP1Q96AE4 644 aaKnown RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 PPA2Q9H2U2 334 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OBP2BQ9NPH6 170 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF223Q9UK11 482 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 MGAT4BQ9UQ53 548 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 VWA8A3KMH1 1905 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ANKRD30BLA7E2S9 258 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 PPP6CO00743 305 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SLC22A2O15244 555 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 PTHP01270 115 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 DHRS4L1P0CG22 281 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 FPR1P21462 350 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 VAMP1P23763 118 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GNRHRP30968 328 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 LGALS4P56470 323 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GINS1Q14691 196 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SEC23BQ15437 767 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 TMEM176BQ3YBM2 270 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SSX6Q7RTT6 188 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ETFBKMTQ8IXQ9 262 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 TCEANCQ8N8B7 351 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OR6Q1Q8NGQ2 317 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OR13F1Q8NGS4 319 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GNPDA2Q8TDQ7 276 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 MRGPRX3Q96LB0 322 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 MS4A4EQ96PG1 132 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF559Q9BR84 538 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ZPBPQ9BS86 351 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GON7Q9BXV9 100 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SLC19A3Q9BZV2 496 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 FAM86C1Q9NVL1 165 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SERGEFQ9UGK8 458 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 CCDC187A0A096LP49 1063 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 AQP12BA6NM10 295 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GPR75O95800 540 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 LINC00271P0C7V0 271 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 TMEM225BP0DP42 221 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SPNP16150 400 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 TRIM23P36406 574 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 GPR18Q14330 331 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OR7A5Q15622 319 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SLC14A2Q15849 920 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 CNTN4Q8IWV2 1026 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 AQP12AQ8IXF9 295 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 OR11L1Q8NGX0 322 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 CPT1CQ8TCG5 803 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SLC37A2Q8TED4 501 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ULBP2Q9BZM5 246 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 SLC6A15Q9H2J7 730 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 MBNL1Q9NR56 388 aaKnown RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF701Q9NV72 531 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-218ENST00000545889 MBD2Q9UBB5 411 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 EMCNQ9ULC0 261 aa8.04□□□□□ -1.12
CLIP1-218ENST00000545889 ABCA4P78363 2273 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 TNFRSF10CO14798 259 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF254O75437 659 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 MRPL3P09001 348 aaKnown RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SELPLGQ14242 412 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 FGFBP1Q14512 234 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 UNC50Q53HI1 259 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 RUNDC3AQ59EK9 446 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 NRARPQ7Z6K4 114 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 FAM217AQ8IXS0 508 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SIRT6Q8N6T7 355 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 TMEM203Q969S6 136 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 VRK1Q99986 396 aaPredicted RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SORBS1Q9BX66 1292 aaKnown RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 HDAC8Q9BY41 377 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 METTL8Q9H825 291 aaKnown RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ANKRA2Q9H9E1 313 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ACSL6Q9UKU0 697 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 M0R129 80 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SURF4O15260 269 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SGCEO43556 437 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 FZD6O60353 706 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 GMDSO60547 372 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 CSO75390 466 aaKnown RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 MC3RP41968 323 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SLC26A5P58743 744 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 GABREP78334 506 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 MAT1AQ00266 395 aaKnown RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 IFITM3Q01628 133 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SMAD2Q15796 467 aaKnown RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 NHSL2Q5HYW2 709 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 FAM180BQ6P0A1 224 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SLC27A4Q6P1M0 643 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 KDM1BQ8NB78 822 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 OR9A2Q8NGT5 310 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 C16orf78Q8WTQ4 265 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 FBXW5Q969U6 566 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 PYURFQ96I23 114 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 MRGPRX1Q96LB2 322 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 OR4K3Q96R72 315 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 BCL7BQ9BQE9 202 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms