RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DTX3Q8N9I9 347 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ZNF527Q8NB42 609 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 SLC16A11Q8NCK7 471 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 FAM71CQ8NEG0 241 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 OR2L3Q8NG85 312 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 SMPDL3BQ92485 455 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 KAT2AQ92830 837 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 GHSRQ92847 366 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 GAL3ST3Q96A11 431 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 SMIM19Q96E16 107 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 TOX2Q96NM4 488 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 RBP7Q96R05 134 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 IFT27Q9BW83 186 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 C1QTNF7Q9BXJ2 289 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 CFHR5Q9BXR6 569 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 ZNF350Q9GZX5 532 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 NANSQ9NR45 359 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 SIGLEC7Q9Y286 467 aa8.11□□□□□ -1.11
TDP1-204ENST00000545686 A0A1B0GVC2 190 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 A6NIN4 97 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 PRRT4C9JH25 899 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 G3V3Q6 166 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 M0R233 179 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 HTR2AP28223 471 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 AP3S2P59780 193 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 ZP1P60852 638 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 SRP54P61011 504 aaKnown RBP8.1□□□□□ -1.11
TDP1-204ENST00000545686 TNFRSF17Q02223 184 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 CDK5R1Q15078 307 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 AGERQ15109 404 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 OR1Q1Q15612 314 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 TCEAL5Q5H9L2 206 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 FAAH2Q6GMR7 532 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 ARHGAP11AQ6P4F7 1023 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 TMEM65Q6PI78 240 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 WDR88Q6ZMY6 472 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 FAM20CQ8IXL6 584 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 OR7G2Q8NG99 324 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 OR2T35Q8NGX2 323 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 ZFPM2Q8WW38 1151 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 PMM1Q92871 262 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 BPIFA2Q96DR5 249 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 C10orf90Q96M02 699 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 SDF2Q99470 211 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 LGR4Q9BXB1 951 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 GSX2Q9BZM3 304 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 SPRTNQ9H040 489 aaPredicted RBP8.1□□□□□ -1.11
TDP1-204ENST00000545686 BRD7Q9NPI1 651 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 RPS6KB2Q9UBS0 482 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 FBXL21Q9UKT6 434 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 PCDHGA9Q9Y5G4 932 aaKnown RBP8.1□□□□□ -1.11
TDP1-204ENST00000545686 KCNJ13O60928 360 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 IFNGP01579 166 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 MT-ND4P03905 459 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 WNT1P04628 370 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 CLTBP09497 229 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 NID1P14543 1247 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 SNRPBP14678 240 aaKnown RBP8.1□□□□□ -1.11
TDP1-204ENST00000545686 CPN1P15169 458 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 IL9P15248 144 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 ENPP1P22413 925 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 NDUFS1P28331 727 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 CMPK1P30085 196 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 ACVR1BP36896 505 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 GDNFP39905 211 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 CCR9P51686 369 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 OR12D2P58182 307 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 NTHL1P78549 312 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 GGTLC2Q14390 218 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 AMZ1Q400G9 498 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
TDP1-204ENST00000545686 PLPP4Q5VZY2 271 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 ZNF425Q6IV72 752 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 GPAT4Q86UL3 456 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 SPICQ8N5J4 248 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 POMGNT2Q8NAT1 580 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 OR6C4Q8NGE1 309 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 OR5J2Q8NH18 312 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 OR4C6Q8NH72 309 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 PFN4Q8NHR9 129 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 DACT3Q96B18 629 aaPredicted RBP8.1□□□□□ -1.11
TDP1-204ENST00000545686 CCDC120Q96HB5 630 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 ZFP3Q96NJ6 502 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 XKR8Q9H6D3 395 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 C20orf141Q9NUB4 165 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 MED9Q9NWA0 146 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 APOBEC3BQ9UH17 382 aaKnown RBP8.1□□□□□ -1.11
TDP1-204ENST00000545686 POMT2Q9UKY4 750 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 TBX21Q9UL17 535 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 MED31Q9Y3C7 131 aa8.1□□□□□ -1.11
TDP1-204ENST00000545686 ZNF879B4DU55 563 aa8.09□□□□□ -1.11
TDP1-204ENST00000545686 GABARAPH6UMI1 98 aa8.09□□□□□ -1.11
TDP1-204ENST00000545686 SULT1B1O43704 296 aa8.09□□□□□ -1.11
TDP1-204ENST00000545686 STATHP02808 62 aa8.09□□□□□ -1.11
TDP1-204ENST00000545686 ATP1B1P05026 303 aa8.09□□□□□ -1.11
TDP1-204ENST00000545686 MRPL3P09001 348 aaKnown RBP8.09□□□□□ -1.11
TDP1-204ENST00000545686 ANKRD34CP0C6C1 535 aa8.09□□□□□ -1.11
TDP1-204ENST00000545686 PYCR1P32322 319 aa8.09□□□□□ -1.11
TDP1-204ENST00000545686 GDI2P50395 445 aaKnown RBP8.09□□□□□ -1.11
TDP1-204ENST00000545686 GBX2P52951 348 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms