RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 IL12AP29459 219 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 SLC7A1P30825 629 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 PGM1P36871 562 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 UFM1P61960 85 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 NKX6-1P78426 367 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-210ENST00000545493 BEX5Q5H9J7 111 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 Q5PR19 223 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 TMEM201Q5SNT2 666 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 GTF2IRD2BQ6EKJ0 949 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 C20orf204Q6ZNR8 217 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 HMGN2P46Q86SG4 172 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 GTF2IRD2Q86UP8 949 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 LSRQ86X29 649 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-210ENST00000545493 LRRC75A-AS1Q8N1F1 130 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 ST8SIA1Q92185 356 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 ROPN1LQ96C74 230 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 POM121Q96HA1 1249 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 REXO5Q96IC2 774 aaKnown RBP18.79■□□□□ 0.6
SCARB1-210ENST00000545493 SLC35A5Q9BS91 424 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 OR10A4Q9H209 315 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 MARCOQ9UEW3 520 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-210ENST00000545493 BTNL2Q9UIR0 455 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 GPR52Q9Y2T5 361 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 WDR45Q9Y484 360 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 FREM1Q5H8C1 2179 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 PRR14LQ5THK1 2151 aa18.79■□□□□ 0.6
SCARB1-210ENST00000545493 TMEM120BA0PK00 339 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 SMAD9O15198 467 aaKnown RBP18.78■□□□□ 0.6
SCARB1-210ENST00000545493 AGR2O95994 175 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 FOSL1P15407 271 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 SESN3P58005 492 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 RAC3P60763 192 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 TSC22D1Q15714 1073 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 HHATQ5VTY9 493 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 EIF3MQ7L2H7 374 aaKnown RBP18.78■□□□□ 0.6
SCARB1-210ENST00000545493 WFDC8Q8IUA0 241 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 ZNF619Q8N2I2 560 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 VPS37AQ8NEZ2 397 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 XAGE5Q8WWM1 108 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 S100PBPQ96BU1 408 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 SAP130Q9H0E3 1048 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 BCO1Q9HAY6 547 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 GP6Q9HCN6 339 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 FANCFQ9NPI8 374 aa18.78■□□□□ 0.6
SCARB1-210ENST00000545493 HMGN4O00479 90 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 SMPD2O60906 423 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 PRKD3O94806 890 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 FPR1P21462 350 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 EDNRAP25101 427 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 EPHA3P29320 983 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 S100A3P33764 101 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 CHI3L1P36222 383 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-210ENST00000545493 CDKN2CP42773 168 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 ATAD3BQ5T9A4 648 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 SHEQ5VZ18 495 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 ZNF704Q6ZNC4 412 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-210ENST00000545493 PLEKHM3Q6ZWE6 761 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 CROCCP2Q86T23 111 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 RNF130Q86XS8 419 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 MGARPQ8TDB4 240 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 OIT3Q8WWZ8 545 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 IGFBPL1Q8WX77 278 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 PIGTQ969N2 578 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 PLPPR2Q96GM1 343 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 OR5B2Q96R09 309 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 WDR55Q9H6Y2 383 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-210ENST00000545493 POLE3Q9NRF9 147 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 ACER3Q9NUN7 267 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 SLC35A3Q9Y2D2 325 aa18.77■□□□□ 0.6
SCARB1-210ENST00000545493 DSCAMO60469 2012 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 GOLGA8QA0A0J9YX86 632 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 GOLGA8OA6NCC3 632 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 CLDN24A6NM45 220 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 GOLGA8NF8WBI6 632 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 ADAM11O75078 769 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 PLAUP00749 431 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 YES1P07947 543 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 HOXB4P17483 251 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-210ENST00000545493 PGCP20142 388 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 CHRNEQ04844 493 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 SYT14P1Q58G82 188 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 AP1ARQ63HQ0 302 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 ABLIM2Q6H8Q1 611 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 SLC43A2Q8N370 569 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 ZG16BQ96DA0 208 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 SMR3AQ99954 134 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 TMEM204Q9BSN7 226 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 INPP5KQ9BT40 448 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 KLHL9Q9P2J3 617 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 GPR45Q9Y5Y3 372 aa18.76■□□□□ 0.59
SCARB1-210ENST00000545493 NSD1Q96L73 2696 aaPredicted RBP18.75■□□□□ 0.59
SCARB1-210ENST00000545493 HDAC3O15379 428 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 CYTIPO60759 359 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 PGRP06401 933 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 FESP07332 822 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 CHRM4P08173 479 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 NR1H2P55055 460 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 HPCAP84074 193 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 MERTKQ12866 999 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 SEZ6L2Q6UXD5 910 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms