RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 MARCH3Q86UD3 253 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 PACS2Q86VP3 889 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 PACRGLQ8N7B6 248 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 OR5W2Q8NH69 310 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 OR5K1Q8NHB7 308 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 DUSP19Q8WTR2 217 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 DNAJC9Q8WXX5 260 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 TMEM234Q8WY98 164 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 SLC38A4Q969I6 547 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 DHRS1Q96LJ7 313 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 HS6ST2Q96MM7 605 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 FRMD6Q96NE9 622 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 NMNAT1Q9HAN9 279 aaPredicted RBP8.68□□□□□ -1.02
YBX3-215ENST00000544504 C12orf10Q9HB07 376 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 LRFN1Q9P244 771 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 CNOT11Q9UKZ1 510 aaKnown RBP8.68□□□□□ -1.02
YBX3-215ENST00000544504 CARD8Q9Y2G2 431 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 KLF13Q9Y2Y9 288 aaPredicted RBP8.68□□□□□ -1.02
YBX3-215ENST00000544504 CHST2Q9Y4C5 530 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 PCDHGB7Q9Y5F8 929 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 CHCHD2Q9Y6H1 151 aaPredicted RBP8.68□□□□□ -1.02
YBX3-215ENST00000544504 EXPH5Q8NEV8 1989 aa8.68□□□□□ -1.02
YBX3-215ENST00000544504 A0A087WZY1 265 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ARRDC5A6NEK1 342 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ANKUB1A6NFN9 424 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 CPSF4LA6NMK7 179 aaKnown RBP8.67□□□□□ -1.02
YBX3-215ENST00000544504 G3V2T6 193 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 K7EM74 188 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 CDC40O60508 579 aaKnown RBP eCLIP8.67□□□□□ -1.02
YBX3-215ENST00000544504 CEACAM4O75871 244 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 NUDT14O95848 222 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 PNMTP11086 282 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 CD46P15529 392 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 CNR1P21554 472 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 VHLP40337 213 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ACAA2P42765 397 aaKnown RBP8.67□□□□□ -1.02
YBX3-215ENST00000544504 MASP1P48740 699 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 MAP2K6P52564 334 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 GAS1P54826 345 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 CDH12P55289 794 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 CACNA1DQ01668 2161 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ZNF117Q03924 483 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 TUBA3CQ13748 450 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 GANABQ14697 944 aaKnown RBP8.67□□□□□ -1.02
YBX3-215ENST00000544504 OR1Q1Q15612 314 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 NPTX1Q15818 432 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 DCST1Q5T197 706 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 TUBA3EQ6PEY2 450 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ULK3Q6PHR2 472 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 SHQ1Q6PI26 577 aaKnown RBP8.67□□□□□ -1.02
YBX3-215ENST00000544504 APOOLQ6UXV4 268 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 RRM2BQ7LG56 351 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 AMIGO2Q86SJ2 522 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 LILRA2Q8N149 483 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 GATSQ8NAP1 163 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ICA1LQ8NDH6 482 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 PSD4Q8NDX1 1056 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 OR4K17Q8NGC6 315 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 OR4D11Q8NGI4 311 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ZNF563Q8TA94 476 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ADAMTS16Q8TE57 1224 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ST8SIA1Q92185 356 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 HAS2Q92819 552 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 SLC41A3Q96GZ6 507 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 TMEM41AQ96HV5 264 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ZNF597Q96LX8 424 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 C5orf34Q96MH7 638 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 KLHL4Q9C0H6 718 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 SEMA6AQ9H2E6 1030 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 SH2D2AQ9NP31 389 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 FLRT3Q9NZU0 649 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 NKX1-2Q9UD57 310 aaPredicted RBP8.67□□□□□ -1.02
YBX3-215ENST00000544504 ENOPH1Q9UHY7 261 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 ICAM5Q9UMF0 924 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 BOKQ9UMX3 212 aaPredicted RBP8.67□□□□□ -1.02
YBX3-215ENST00000544504 A4GNTQ9UNA3 340 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 TESMINQ9Y4I5 508 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 PCDHGA9Q9Y5G4 932 aaKnown RBP8.67□□□□□ -1.02
YBX3-215ENST00000544504 ORC6Q9Y5N6 252 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 LYVE1Q9Y5Y7 322 aa8.67□□□□□ -1.02
YBX3-215ENST00000544504 PCSK5Q92824 1860 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 A6NL46 340 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 H0YJX3 145 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 MASP2O00187 686 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 FRS3O43559 492 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 CHP2O43745 196 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 MAN1A2O60476 641 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 SLC25A12O75746 678 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 DIRAS1O95057 198 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 CCNB2O95067 398 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 WDPCPO95876 746 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 HPRP00739 348 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 GKN3PP0CG01 181 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 ANXA8P13928 327 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 CDH2P19022 906 aaPredicted RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 FKBP2P26885 142 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 GRNP28799 593 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 CD96P40200 585 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 EIF1P41567 113 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 RBM34P42696 430 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms