RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MEX3DQ86XN8 651 aaKnown RBP27.76■■■□□ 2.03
CCM2-219ENST00000544363 ZNF524Q96C55 264 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 FER1L6-AS2Q96M78 137 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 ATP13A2Q9NQ11 1180 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 SDHAF3Q9NRP4 125 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 WDR70Q9NW82 654 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 CNIH4Q9P003 139 aa27.76■■■□□ 2.03
CCM2-219ENST00000544363 A0A087WUJ7 227 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 C2orf72A6NCS6 295 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 TRABD2BA6NFA1 517 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 KLF4O43474 513 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 NUDT14O95848 222 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 CHMP24386 653 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 FPR3P25089 353 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 MST1P26927 711 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 SLC1A3P43003 542 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 ALDH6A1Q02252 535 aaKnown RBP27.75■■■□□ 2.03
CCM2-219ENST00000544363 RAPSNQ13702 412 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 COL28A1Q2UY09 1125 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 B3GNTL1Q67FW5 361 aaPredicted RBP27.75■■■□□ 2.03
CCM2-219ENST00000544363 TMEM81Q6P7N7 255 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 TTC33Q6PID6 262 aaPredicted RBP27.75■■■□□ 2.03
CCM2-219ENST00000544363 Q6ZPB1 254 aaPredicted RBP27.75■■■□□ 2.03
CCM2-219ENST00000544363 VASH2Q86V25 355 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 PFN4Q8NHR9 129 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 HPF1Q9NWY4 346 aa27.75■■■□□ 2.03
CCM2-219ENST00000544363 TP53P04637 393 aaPredicted RBP27.74■■■□□ 2.03
CCM2-219ENST00000544363 MYBPC1Q00872 1141 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 AIMP2Q13155 320 aaKnown RBP27.74■■■□□ 2.03
CCM2-219ENST00000544363 MEP1AQ16819 746 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 ACER2Q5QJU3 275 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 ATG4DQ86TL0 474 aaPredicted RBP27.74■■■□□ 2.03
CCM2-219ENST00000544363 SETD9Q8NE22 299 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 GPR119Q8TDV5 335 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 NXPE2Q96DL1 559 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 ADAM19Q9H013 955 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 WIF1Q9Y5W5 379 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 MAGEA13PA6NCF6 341 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 LYNP07948 512 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 PNMTP11086 282 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 GPR4P46093 362 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 CTBP2P56545 445 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 SNTA1Q13424 505 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 TOMM34Q15785 309 aaPredicted RBP27.74■■■□□ 2.03
CCM2-219ENST00000544363 OR5M10Q6IEU7 315 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 LSRQ86X29 649 aaPredicted RBP27.74■■■□□ 2.03
CCM2-219ENST00000544363 APOL4Q9BPW4 351 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 C12orf10Q9HB07 376 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 MEPEQ9NQ76 525 aaPredicted RBP27.74■■■□□ 2.03
CCM2-219ENST00000544363 PPP4R1LQ9P1A2 415 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 TMEM5Q9Y2B1 443 aa27.74■■■□□ 2.03
CCM2-219ENST00000544363 KPNA4O00629 521 aaPredicted RBP27.73■■■□□ 2.03
CCM2-219ENST00000544363 SOX14O95416 240 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 IFI30P13284 250 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 SUMO3P55854 103 aaPredicted RBP27.73■■■□□ 2.03
CCM2-219ENST00000544363 ISL1P61371 349 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 PTGES3Q15185 160 aaKnown RBP27.73■■■□□ 2.03
CCM2-219ENST00000544363 CDK20Q8IZL9 346 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 CPNE5Q9HCH3 593 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 HHATLQ9HCP6 504 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 SH2D2AQ9NP31 389 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 C20orf141Q9NUB4 165 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 HSPE1-MOB4S4R3N1 261 aa27.73■■■□□ 2.03
CCM2-219ENST00000544363 IGLV3-32A0A0A0MS00 114 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 ANKUB1A6NFN9 424 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 ELOA3DA6NLF2 546 aaPredicted RBP27.72■■■□□ 2.03
CCM2-219ENST00000544363 POU1F1P28069 291 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 MSX1P28360 303 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 GGT2P36268 569 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 ELOA3BQ3SY89 546 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 SLC30A6Q6NXT4 461 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 RASSF6Q6ZTQ3 369 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 ELOA3Q8NG57 546 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 PAQR8Q8TEZ7 354 aa27.72■■■□□ 2.03
CCM2-219ENST00000544363 ZAR1LA6NP61 321 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 H3BN98 237 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 GNB5O14775 395 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 IGFBP1P08833 259 aaPredicted RBP27.71■■■□□ 2.03
CCM2-219ENST00000544363 GP1BBP13224 206 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 TACR3P29371 465 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 QPRTQ15274 297 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 TBC1D25Q3MII6 688 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 ZNF468Q5VIY5 522 aaPredicted RBP27.71■■■□□ 2.03
CCM2-219ENST00000544363 BPIFA2Q96DR5 249 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 SGCZQ96LD1 299 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 ING2Q9H160 280 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 TAS2R10Q9NYW0 307 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 MED11Q9P086 117 aa27.71■■■□□ 2.03
CCM2-219ENST00000544363 B4DXG7 233 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 CDC40O60508 579 aaKnown RBP eCLIP27.7■■■□□ 2.03
CCM2-219ENST00000544363 MAKP20794 623 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 ATP1A1-AS1Q5TC04 95 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 SLC22A10Q63ZE4 541 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 ISLR2Q6UXK2 745 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 TMPRSS11FQ6ZWK6 438 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 KIF18BQ86Y91 864 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 CCDC71Q8IV32 467 aaPredicted RBP27.7■■■□□ 2.03
CCM2-219ENST00000544363 CLEC1AQ8NC01 280 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 DPH1Q9BZG8 443 aa27.7■■■□□ 2.03
CCM2-219ENST00000544363 LHPPQ9H008 270 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms