RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	SNAPC1	Q16533	368 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	BICRAL	Q6AI39	1079 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	OR8J1	Q8NGP2	316 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	CREB3L1	Q96BA8	519 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	SLC38A1	Q9H2H9	487 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	PPP1R3E	Q9H7J1	279 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	ZFP64	Q9NPA5	681 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	NDUFB11	Q9NX14	153 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	NDOR1	Q9UHB4	597 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	CDH10	Q9Y6N8	788 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	KIR2DS5	A0A0G2JLQ3	304 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268		A0A0G2JNG1	304 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268		B4DGG1	531 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	KIR2DS3	K7RE56	304 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	CHP2	O43745	196 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	SLC2A10	O95528	541 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	NME1	P15531	152 aa	Known RBP	13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	ZP3	P21754	424 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	CMPK1	P30085	196 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	PPP2R1B	P30154	601 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	PDX1	P52945	283 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	GAS1	P54826	345 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	KIR2DS5	Q14953	304 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	TMEM201	Q5SNT2	666 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	C22orf42	Q6IC83	251 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	MRM1	Q6IN84	353 aa	Known RBP	13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	ZNF761	Q86XN6	746 aa	Predicted RBP	13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	LRRC17	Q8N6Y2	441 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	SLC16A11	Q8NCK7	471 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	OR9Q1	Q8NGQ5	310 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	OR10G6	Q8NH81	332 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	ZCCHC10	Q8TBK6	192 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	FGF11	Q92914	225 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	SOST	Q9BQB4	213 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	EMC7	Q9NPA0	242 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	POT1	Q9NUX5	634 aa		13.9	□□□□□ -0.18
CHFR-223	ENST00000544268	OR6C74	A6NCV1	312 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	ZNF860	A6NHJ4	632 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	HK1	P19367	917 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	GPR4	P46093	362 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	GSTM5	P46439	218 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	CSNK1E	P49674	416 aa	Known RBP	13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	FGFBP1	Q14512	234 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	KLHL22	Q53GT1	634 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	ZNF311	Q5JNZ3	666 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	FAM209B	Q5JX69	171 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	SLC30A6	Q6NXT4	461 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	FLVCR1-AS1	Q8TAF5	88 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	ZDHHC1	Q8WTX9	485 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	UFD1	Q92890	307 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	RIT1	Q92963	219 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	PHF21A	Q96BD5	680 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	DPCD	Q9BVM2	203 aa	Predicted RBP	13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	SHARPIN	Q9H0F6	387 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	ADAM29	Q9UKF5	820 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	CACNG2	Q9Y698	323 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	ZDBF2	Q9HCK1	2354 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	NCOR1	O75376	2440 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	THADA	Q6YHU6	1953 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	HYAL3	O43820	417 aa	Predicted RBP	13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	DRD2	P14416	443 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	KHK	P50053	298 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	TAS2R41	P59536	307 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	RPS25	P62851	125 aa	Known RBP	13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	FCN2	Q15485	313 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	ZNF425	Q6IV72	752 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	SLC48A1	Q6P1K1	146 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	METAP1D	Q6UB28	335 aa	Predicted RBP	13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	CFAP77	Q6ZQR2	320 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	VN1R4	Q7Z5H5	301 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	NUP43	Q8NFH3	380 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	BBS1	Q8NFJ9	593 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	OR2L5	Q8NG80	312 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	OR7G2	Q8NG99	324 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	AP3S1	Q92572	193 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	PTP4A1	Q93096	173 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	SGTB	Q96EQ0	304 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	KCNJ15	Q99712	375 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	TMEM43	Q9BTV4	400 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	MED28	Q9H204	178 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	MCCC2	Q9HCC0	563 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	RDH8	Q9NYR8	311 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	GLS2	Q9UI32	602 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	SLC9A8	Q9Y2E8	581 aa		13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	RPL36	Q9Y3U8	105 aa	Known RBP	13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	SPIN1	Q9Y657	262 aa	Predicted RBP	13.89	□□□□□ -0.19
CHFR-223	ENST00000544268	TECTA	O75443	2155 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	CFAP54	Q96N23	3096 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	LOC102723532	A0A0G2JNH3	316 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	GSAP	A4D1B5	854 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	DVL2	O14641	736 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	WDPCP	O95876	746 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	LALBA	P00709	142 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	ZNF888	P0CJ79	500 aa	Predicted RBP	13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	FNTB	P49356	437 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	S100A12	P80511	92 aa		13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	SIM1	P81133	766 aa	Predicted RBP	13.88	□□□□□ -0.19
CHFR-223	ENST00000544268	MLC1	Q15049	377 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms