RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 OR6F1Q8NGZ6 308 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 LRIG1Q96JA1 1093 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 TPPP3Q9BW30 176 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 INIPQ9NRY2 104 aa14.5□□□□□ -0.09
CHD4-210ENST00000544040 ONECUT3O60422 494 aaPredicted RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 ENTPD8Q5MY95 495 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 NDUFAF7Q7L592 441 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 PLXDC1Q8IUK5 500 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 GLB1L2Q8IW92 636 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 LPAR4Q99677 370 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 TGIF2Q9GZN2 237 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 BTNL2Q9UIR0 455 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 OR52A4PA6NMU1 304 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 BET1O15155 118 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 NPBWR1P48145 328 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 ZNF691Q5VV52 312 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 TPRA1Q86W33 373 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 KDM8Q8N371 416 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 GGHQ92820 318 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 PITHD1Q9GZP4 211 aaPredicted RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 ZDHHC7Q9NXF8 308 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 PGAP2Q9UHJ9 254 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 RNASET2O00584 256 aaKnown RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 GABRPO00591 440 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 DPM1O60762 260 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 DDCP20711 480 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 CLDN12P56749 244 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 RING1Q06587 406 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 RAB40BQ12829 278 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 ILKQ13418 452 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 SMN1Q16637 294 aaKnown RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 OR2G6Q5TZ20 316 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 CD200R1Q8TD46 325 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 HPSE2Q8WWQ2 592 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 SGK3Q96BR1 496 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 CHRDQ9H2X0 955 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 OSGIN1Q9UJX0 560 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 CTDSP2O14595 271 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 GPR32O75388 356 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 ZNF28P17035 718 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 HMGCLP35914 325 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 TAS2R19P59542 299 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 JAG1P78504 1218 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 SHEQ5VZ18 495 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 CPZQ66K79 652 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 ZNF322Q6U7Q0 402 aaPredicted RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 MITD1Q8WV92 249 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 SLC17A9Q9BYT1 436 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 MED20Q9H944 212 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 SLC23A2Q9UGH3 650 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 A0A0A6YYC8 382 aaPredicted RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 I3L1I5 382 aaPredicted RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 EGFP01133 1207 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 GPX3P22352 226 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 SERPINF1P36955 418 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 BRICD5Q6PL45 260 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 FAM57BQ71RH2 274 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 MEPCEQ7L2J0 689 aaKnown RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 ZFAND1Q8TCF1 268 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 TFAP2CQ92754 450 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 NEIL2Q969S2 332 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 MRI1Q9BV20 369 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 Q9Y3F1 56 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 GABRR3A8MPY1 467 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 ZNF280AP59817 542 aaPredicted RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 B3GLCTQ6Y288 498 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 Q6ZPB1 254 aaPredicted RBP14.49□□□□□ -0.09
CHD4-210ENST00000544040 KDM1BQ8NB78 822 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 OR7G3Q8NG95 312 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 FAM213BQ8TBF2 198 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 HSD17B8Q92506 261 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 ZNF75AQ96N20 296 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 AGPAT4Q9NRZ5 378 aa14.49□□□□□ -0.09
CHD4-210ENST00000544040 I6L893 689 aaPredicted RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 TUSC2O75896 110 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 F2P00734 622 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 SDC1P18827 310 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 CSNK1A1P48729 337 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 NDUFA6P56556 154 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 OR7E24Q6IFN5 339 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 GDPGP1Q6ZNW5 385 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 TMEM25Q86YD3 366 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 METTL4Q8N3J2 472 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 LILRB4Q8NHJ6 448 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 TMEM163Q8TC26 289 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ADAMTS18Q8TE60 1221 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 BORCS6Q96GS4 357 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ACAD8Q9UKU7 415 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 FBXO7Q9Y3I1 522 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 CDC14CA4D256 554 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 TCEAL1Q15170 157 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ADGRG5Q8IZF4 528 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHD4-210ENST00000544040 MYADMQ96S97 322 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 SIDT1Q9NXL6 827 aaKnown RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 MROH2AA6NES4 1674 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ABCC6O95255 1503 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 ANTXRLA6NF34 631 aa14.48□□□□□ -0.09
CHD4-210ENST00000544040 RBMS1P29558 406 aaKnown RBP14.48□□□□□ -0.09
CHD4-210ENST00000544040 TAS2R30P59541 319 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms