RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 GINS1Q14691 196 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 FOXB2Q5VYV0 432 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 SLX4IPQ5VYV7 408 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CASP12Q6UXS9 341 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 KCTD8Q6ZWB6 473 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 ZNF440Q8IYI8 595 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 ZNF540Q8NDQ6 660 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 FAM71CQ8NEG0 241 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 OR8K3Q8NH51 312 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 ZNF566Q969W8 418 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 IL4I1Q96RQ9 567 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 DPH1Q9BZG8 443 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CCDC90BQ9GZT6 254 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 AMBNQ9NP70 447 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 MEPEQ9NQ76 525 aaPredicted RBP10.09□□□□□ -0.79
SCG3-202ENST00000542355 SCN3BQ9NY72 215 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 TVP23BQ9NYZ1 205 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 TPRKBQ9Y3C4 175 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 MED31Q9Y3C7 131 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 HS3ST3B1Q9Y662 390 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 CACNA1HO95180 2353 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 ZNF318Q5VUA4 2279 aa10.09□□□□□ -0.79
SCG3-202ENST00000542355 IGHV1-45A0A0A0MS14 117 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 TRIM64CA6NLI5 447 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 HCRTR2O43614 444 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 FAM20BO75063 409 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 OR6B1O95007 311 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 GABRB1P18505 474 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 FUT1P19526 365 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 MAKP20794 623 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 FBXW4P57775 412 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 RPS18P62269 152 aaKnown RBP10.08□□□□□ -0.8
SCG3-202ENST00000542355 CLEC12AQ5QGZ9 265 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 BROXQ5VW32 411 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 ACSM5Q6NUN0 579 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 ZNF773Q6PK81 442 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 C16orf54Q6UWD8 224 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 RASSF6Q6ZTQ3 369 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 CDK20Q8IZL9 346 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 POGLUT1Q8NBL1 392 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 TEX47Q8TBZ9 253 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 TMIGD2Q96BF3 282 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 BPIFA2Q96DR5 249 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 HS6ST2Q96MM7 605 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 PRRX2Q99811 253 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 KLHDC3Q9BQ90 382 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 RHNO1Q9BSD3 238 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 DEFB126Q9BYW3 111 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 FOXJ2Q9P0K8 574 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 MYOTQ9UBF9 498 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 SCO2O43819 266 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 PPM1BO75688 479 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 OR2J2O76002 312 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 DLGAP3O95886 979 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 COX6A1P12074 109 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 EVI2BP34910 448 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 GABARAPL2P60520 117 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 PSPHP78330 225 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 CDK5Q00535 292 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 ZNF117Q03924 483 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 PRKCDQ05655 676 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 EIF3IQ13347 325 aaKnown RBP10.08□□□□□ -0.8
SCG3-202ENST00000542355 C12orf73Q69YU5 71 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 GLRX5Q86SX6 157 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 SPARTQ8N0X7 666 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 OR8D4Q8NGM9 314 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 WDR36Q8NI36 951 aaKnown RBP10.08□□□□□ -0.8
SCG3-202ENST00000542355 ELP5Q8TE02 316 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 SPRY4Q9C004 299 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 EXOSC3Q9NQT5 275 aaKnown RBP10.08□□□□□ -0.8
SCG3-202ENST00000542355 IL20RAQ9UHF4 553 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 TCFL5Q9UL49 500 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 PCDHGA3Q9Y5H0 932 aa10.08□□□□□ -0.8
SCG3-202ENST00000542355 COL27A1Q8IZC6 1860 aaPredicted RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 A0A1W2PQD3 144 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 FADS1O60427 444 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 MPZL2O60487 215 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 NADKO95544 446 aaPredicted RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 NGFRP08138 427 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 CELA2AP08217 269 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 HTR1AP08908 422 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 CD63P08962 238 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 SAGP10523 405 aaPredicted RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 ITPKBP27987 946 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 ALDH3B2P48448 385 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 SMSP52788 366 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 NUDT6P53370 316 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 CSNK2BP67870 215 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 SLC35A2P78381 396 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 EFR3AQ14156 821 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 NEDD8Q15843 81 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 WBP2NLQ6ICG8 309 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 SLC27A4Q6P1M0 643 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 LINC00114Q6XXX2 140 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 TCEANCQ8N8B7 351 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 OR11G2Q8NGC1 345 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 ZNF563Q8TA94 476 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 CT55Q8WUE5 264 aa10.07□□□□□ -0.8
SCG3-202ENST00000542355 DNAJA4Q8WW22 397 aaPredicted RBP10.07□□□□□ -0.8
SCG3-202ENST00000542355 C3orf49Q96BT1 292 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms