RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 GDF7Q7Z4P5 450 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 DHDDSQ86SQ9 333 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 OR52P1PQ8NH57 321 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 ZNF563Q8TA94 476 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 BBS10Q8TAM1 723 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 SLC25A43Q8WUT9 341 aaPredicted RBP12.03□□□□□ -0.48
CCDC130-202ENST00000540216 FIG4Q92562 907 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 RNASE6Q93091 150 aaKnown RBP12.03□□□□□ -0.48
CCDC130-202ENST00000540216 CPNE4Q96A23 557 aaPredicted RBP12.03□□□□□ -0.48
CCDC130-202ENST00000540216 TMEM19Q96HH6 336 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 ZNF845Q96IR2 970 aaPredicted RBP12.03□□□□□ -0.48
CCDC130-202ENST00000540216 TMEM185BQ9H7F4 350 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 ACER3Q9NUN7 267 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 DNAJB12Q9NXW2 375 aaKnown RBP12.03□□□□□ -0.48
CCDC130-202ENST00000540216 JKAMPQ9P055 326 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 PACSIN3Q9UKS6 424 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 ZNF232Q9UNY5 417 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 IFT52Q9Y366 437 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 NAV2Q8IVL1 2488 aa12.03□□□□□ -0.48
CCDC130-202ENST00000540216 MED12LQ86YW9 2145 aa12.02□□□□□ -0.48
CCDC130-202ENST00000540216 NOTCH2Q04721 2471 aa12.02□□□□□ -0.48
CCDC130-202ENST00000540216 A0A0J9YW62 118 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 CDHR4A6H8M9 788 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 CLDN24A6NM45 220 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 EEF1E1-BLOC1S5C9J1V9 151 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 TNFSF11O14788 317 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 SLC22A2O15244 555 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 EEF1E1O43324 174 aaKnown RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 EFNA2O43921 213 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 BCAS1O75363 584 aaPredicted RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 TNFSF13O75888 250 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 PABPC4LP0CB38 370 aaKnown RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 ARAFP10398 606 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 ETS2P15036 469 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 IL11P20809 199 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 FKBP2P26885 142 aaKnown RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 SLC7A1P30825 629 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 SFTPDP35247 375 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 APOBEC1P41238 236 aaKnown RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 HTR3AP46098 478 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 CARD18P57730 90 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 PLAURQ03405 335 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 MERTKQ12866 999 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 FOXF2Q12947 444 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 NFYCQ13952 458 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 COQ5Q5HYK3 327 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 RNF220Q5VTB9 566 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 PLEKHM3Q6ZWE6 761 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 GRINAQ7Z429 371 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 HMGN2P46Q86SG4 172 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 MCEMP1Q8IX19 187 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 GCNT2Q8N0V5 402 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 CNOT9Q92600 299 aaKnown RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 ZNF524Q96C55 264 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 C14orf79Q96F83 325 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 CGREF1Q99674 301 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 CPPED1Q9BRF8 314 aaPredicted RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 PRRG4Q9BZD6 226 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 TRIM8Q9BZR9 551 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 TMEM38AQ9H6F2 299 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 SAR1AQ9NR31 198 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 GLRX2Q9NS18 164 aa12.02□□□□□ -0.49
CCDC130-202ENST00000540216 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 SPIN1Q9Y657 262 aaPredicted RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 ANKHD1Q8IWZ3 2542 aaKnown RBP12.02□□□□□ -0.49
CCDC130-202ENST00000540216 CRYBG3Q68DQ2 2970 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 CFAP73A6NFT4 308 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 CYSRT1A8MQ03 144 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 BBIP1A8MTZ0 92 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 MSTNO14793 375 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 CXCL13O43927 109 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 PGM3O95394 542 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 NUDT7P0C024 238 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 CD1EP15812 388 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 SSTR2P30874 369 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 RYKP34925 604 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 MAP2K6P52564 334 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 SORDQ00796 357 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 GUSBP1Q15486 140 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 TMEM176BQ3YBM2 270 aaPredicted RBP12.01□□□□□ -0.49
CCDC130-202ENST00000540216 RUNDC3AQ59EK9 446 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 RPS26P11Q5JNZ5 115 aaPredicted RBP12.01□□□□□ -0.49
CCDC130-202ENST00000540216 GTF2IRD2BQ6EKJ0 949 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 REEP3Q6NUK4 255 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 PLXDC2Q6UX71 529 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 ZNF836Q6ZNA1 936 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 GTF2IRD2Q86UP8 949 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 RETREG3Q86VR2 466 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 KRT73Q86Y46 540 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 KIF18BQ86Y91 864 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 C10orf82Q8WW14 230 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 OSTF1Q92882 214 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 MAL2Q969L2 176 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 SLC35B4Q969S0 331 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 REXO5Q96IC2 774 aaKnown RBP12.01□□□□□ -0.49
CCDC130-202ENST00000540216 GMPPAQ96IJ6 420 aaPredicted RBP12.01□□□□□ -0.49
CCDC130-202ENST00000540216 ANKRD27Q96NW4 1050 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 SPATA5L1Q9BVQ7 753 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 CCDC106Q9BWC9 280 aa12.01□□□□□ -0.49
CCDC130-202ENST00000540216 SPATA9Q9BWV2 254 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms