RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PLPP1O14494 284 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 ARPC1BO15143 372 aaKnown RBP9.31□□□□□ -0.92
TRAF1-202ENST00000540010 PRKRAO75569 313 aaKnown RBP9.31□□□□□ -0.92
TRAF1-202ENST00000540010 PAHP00439 452 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 MT-ND4P03905 459 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 RLN2P04090 185 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 FURINP09958 794 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 PRKCAP17252 672 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 CCKBRP32239 447 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 TGM4P49221 684 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 AGERQ15109 404 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 FBXO42Q6P3S6 717 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 TMEM92Q6UXU6 159 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 C10orf111Q8N326 155 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 DEFB119Q8N690 84 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 OR2AJ1Q8NGZ0 328 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 PTCHD1Q96NR3 888 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF350Q9GZX5 532 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 OR52D1Q9H346 318 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 MTCH2Q9Y6C9 303 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 PCM1Q15154 2024 aa9.31□□□□□ -0.92
TRAF1-202ENST00000540010 TRAV27A0A087WT01 109 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 LDB3O75112 727 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 ITGA5P08648 1049 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 MLF2Q15773 248 aaPredicted RBP9.3□□□□□ -0.92
TRAF1-202ENST00000540010 MMP21Q8N119 569 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 BEST3Q8N1M1 668 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 LINC01555Q8NAE3 123 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 GALNT11Q8NCW6 608 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 OR2L8Q8NGY9 312 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 DYNC2LI1Q8TCX1 351 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 THAP3Q8WTV1 239 aaPredicted RBP9.3□□□□□ -0.92
TRAF1-202ENST00000540010 C4orf36Q96KX1 117 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 FCRL1Q96LA6 429 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 PRRC1Q96M27 445 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 MS4A8Q9BY19 250 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 ACTRT3Q9BYD9 372 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 TMEM168Q9H0V1 697 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 GALNT9Q9HCQ5 603 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 TBC1D29Q9UFV1 150 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 CABIN1Q9Y6J0 2220 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 GABRPO00591 440 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 UCHL1P09936 223 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 CSNK1G2P78368 415 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 REEP5Q00765 189 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 SQSTM1Q13501 440 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 ANKRD53Q8N9V6 530 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 CREB3L4Q8TEY5 395 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 SGTBQ96EQ0 304 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 HS6ST2Q96MM7 605 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 CNN2Q99439 309 aaKnown RBP9.3□□□□□ -0.92
TRAF1-202ENST00000540010 BABAM2Q9NXR7 383 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 NDRG4Q9ULP0 352 aaKnown RBP9.3□□□□□ -0.92
TRAF1-202ENST00000540010 CACNA1IQ9P0X4 2223 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 CDH23Q9H251 3354 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF705EA8MWA4 302 aaPredicted RBP9.3□□□□□ -0.92
TRAF1-202ENST00000540010 EEF1E1-BLOC1S5C9J1V9 151 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 YY2O15391 372 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 HCKP08631 526 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 PRKACBP22694 351 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 HSD11B1P28845 292 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 SLC19A1P41440 591 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 ART1P52961 327 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 CLDN12P56749 244 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 NKPD1Q17RQ9 610 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 COL28A1Q2UY09 1125 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 TMEM35AQ53FP2 167 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 SLC22A10Q63ZE4 541 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 FAM71E1Q6IPT2 247 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 Q6ZSR6 202 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 ZNF550Q7Z398 422 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 CALHM3Q86XJ0 350 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 TMEM239Q8WW34 195 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 ACOT11Q8WXI4 607 aaPredicted RBP9.3□□□□□ -0.92
TRAF1-202ENST00000540010 NXPE2Q96DL1 559 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 GPR174Q9BXC1 333 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 KCMF1Q9P0J7 381 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 IER3IP1Q9Y5U9 82 aa9.3□□□□□ -0.92
TRAF1-202ENST00000540010 WASHC1A8K0Z3 465 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 M0R036 132 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 FABP7O15540 132 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 CSO75390 466 aaKnown RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SULT1C4O75897 302 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 AHSA1O95433 338 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 C1QCP02747 245 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SCG5P05408 212 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 LIPCP11150 499 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PTPN6P29350 595 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 SHC1P29353 583 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PKLRP30613 574 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 EFR3AQ14156 821 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 UBXN2BQ14CS0 331 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 LEG1Q6P5S2 330 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 HAGHLQ6PII5 290 aaPredicted RBP9.29□□□□□ -0.92
TRAF1-202ENST00000540010 OR6T1Q8NGN1 323 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 CCL4L1Q8NHW4 92 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 ZDHHC1Q8WTX9 485 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 CDS1Q92903 461 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 RXFP3Q9NSD7 469 aa9.29□□□□□ -0.92
TRAF1-202ENST00000540010 PCDHGB2Q9Y5G2 931 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms