RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 PCDHGA3Q9Y5H0 932 aa9.36□□□□□ -0.91
SPARC-209ENST00000539687 TP53BP1Q12888 1972 aaPredicted RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 PNMA8CA0A1B0GUJ8 204 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 CPED1A4D0V7 1026 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 ELOA3DA6NLF2 546 aaPredicted RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 PRR23D1E9PI22 279 aaPredicted RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 HRKO00198 91 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 BHLHE40O14503 412 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 SIGLEC6O43699 453 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 AKAP8O43823 692 aaKnown RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 SCRG1O75711 98 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 CFIP05156 583 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 INHBBP09529 407 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 TSPAN19P0C672 248 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 PRR23D2P0DMB1 279 aaPredicted RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 CKMT1AP12532 417 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 PEPDP12955 493 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 CPEP16870 476 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 GALP22466 123 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 GADD45AP24522 165 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 S100A5P33763 92 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 ENTPD1P49961 510 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 NCS1P62166 190 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 DCDP81605 110 aaKnown RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 DAB2P98082 770 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 BDH1Q02338 343 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 CSTF1Q05048 431 aaKnown RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 CRYZQ08257 329 aaKnown RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 LGALS3BPQ08380 585 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 CAMK2BQ13554 666 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 IL11RAQ14626 422 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 EBPQ15125 230 aaKnown RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 TSTQ16762 297 aaKnown RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 ELOA3BQ3SY89 546 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 LCN1P1Q5VSP4 162 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 NUP210LQ5VU65 1888 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 C16orf87Q6PH81 154 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 ZC3H14Q6PJT7 736 aaKnown RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 TSSK4Q6SA08 328 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 C5orf46Q6UWT4 87 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 HSDL2Q6YN16 418 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 ZAR1Q86SH2 424 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 LAPTM4BQ86VI4 370 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 ELOA3Q8NG57 546 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 MCFD2Q8NI22 146 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 NDNFQ8TB73 568 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 ADIPOR1Q96A54 375 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 OPALINQ96PE5 141 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 PHOX2BQ99453 314 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 GAREM1Q9H706 876 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 HAO2Q9NYQ3 351 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 CRNNQ9UBG3 495 aaPredicted RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 MKL2Q9ULH7 1088 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 SIGLEC7Q9Y286 467 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 DTX4Q9Y2E6 619 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 ZNF337Q9Y3M9 751 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 PEX16Q9Y5Y5 336 aa9.35□□□□□ -0.91
SPARC-209ENST00000539687 COL5A1P20908 1838 aaPredicted RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 TDRD6O60522 2096 aaKnown RBP9.35□□□□□ -0.91
SPARC-209ENST00000539687 EML5Q05BV3 1969 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 THADAQ6YHU6 1953 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 SAGE2PA6NJ88 616 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 CDC42EP2O14613 210 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 SLC30A4O14863 429 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 CDC40O60508 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
SPARC-209ENST00000539687 PTP4A3O75365 173 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 UTS2O95399 124 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 IGHA1P01876 353 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 HEXBP07686 556 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 CD63P08962 238 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 GAAP10253 952 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 APEHP13798 732 aaKnown RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 NAGAP17050 411 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 CD53P19397 219 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 PGCP20142 388 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 MAKP20794 623 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 NOS3P29474 1203 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 GRK6P43250 576 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 BMXP51813 675 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 TAS2R43P59537 309 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 CCL7P80098 99 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 FOXK2Q01167 660 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 PLCXD2Q0VAA5 305 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 GPR50Q13585 617 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 TPBGQ13641 420 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 TRAM1Q15629 374 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 ZNF528Q3MIS6 628 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 NKAIN1Q4KMZ8 207 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 FNDC7Q5VTL7 733 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 NIPAL3Q6P499 406 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 GUSBP11Q6P575 273 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 SLC23A3Q6PIS1 610 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 KIRREL2Q6UWL6 708 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 WDR88Q6ZMY6 472 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 DPY19L2P2Q6ZN68 376 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 MEPCEQ7L2J0 689 aaKnown RBP9.34□□□□□ -0.91
SPARC-209ENST00000539687 PPP1R3BQ86XI6 285 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 GATAD2AQ86YP4 633 aa9.34□□□□□ -0.91
SPARC-209ENST00000539687 GPALPP1Q8IXQ4 340 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms