RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 COL9A1P20849 921 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TRAM2Q15035 370 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 MINDY4Q4G0A6 757 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 PLA1AQ53H76 456 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TMEM196Q5HYL7 178 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 AADACL4Q5VUY2 407 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 FBXO46Q6PJ61 603 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 IDO2Q6ZQW0 420 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 FTMTQ8N4E7 242 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TOMM5Q8N4H5 51 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 SCARF2Q96GP6 870 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 C1QTNF7Q9BXJ2 289 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ACTRT3Q9BYD9 372 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 OR10A4Q9H209 315 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 HEXA-AS1Q9H8Q6 139 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 FBXO34Q9NWN3 711 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 B3GNT2Q9NY97 397 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 F5P12259 2224 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3DA0A087WVF3 549 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3IA0A087WXS9 549 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3EA0A087X179 549 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3KA0A087X1G2 549 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 PRSS38A1L453 326 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3FA6NER0 549 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3LB9A6J9 549 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ATP6V1G2-DDX39BF2Z307 99 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 SMAD9O15198 467 aaKnown RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ADRB1P08588 477 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3HP0C7X1 549 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 GKN3PP0CG01 181 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 RUNX2Q13950 521 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 MAPK14Q16539 360 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 PRAMEF8Q5VWM4 474 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 PRAMEF7Q5VXH5 474 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3GQ6DHY5 549 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3CQ6IPX1 549 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 MFSD12Q6NUT3 480 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 RD3Q7Z3Z2 195 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 LUZP2Q86TE4 346 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TBC1D3Q8IZP1 549 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 RFLNBQ8N5W9 214 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 OR1E3Q8WZA6 343 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 DPH1Q9BZG8 443 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ELF5Q9UKW6 265 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 RNF13O43567 381 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 FZD7O75084 574 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 AHCYP23526 432 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 CMPK1P30085 196 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 PBX2P40425 430 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 PITPNBP48739 271 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 MAP2K6P52564 334 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 CLDN12P56749 244 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 FXYD6P3P58550 94 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ID2Q02363 134 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TFF2Q03403 129 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 DSG2Q14126 1118 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 GNA13Q14344 377 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 AANATQ16613 207 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 DUSP5Q16690 384 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 TRMT12Q53H54 448 aaKnown RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 C9orf50Q5SZB4 431 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 SFRP5Q5T4F7 317 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF776Q68DI1 518 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF322Q6U7Q0 402 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 WDR88Q6ZMY6 472 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 NRROSQ86YC3 692 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ZCCHC10Q8TBK6 192 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 LCN9Q8WX39 176 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 FAM131CQ96AQ9 280 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 MOAP1Q96BY2 351 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 CLEC4MQ9H2X3 399 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 KIR3DX1Q9H7L2 352 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 IL20Q9NYY1 176 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 MRPS2Q9Y399 296 aaKnown RBP11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF780BQ9Y6R6 833 aa11.64□□□□□ -0.55
SFSWAP-208ENST00000539506 GNB5O14775 395 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 WNT1P04628 370 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 ZGLP1P0C6A0 271 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 ANXA3P12429 323 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF136P52737 540 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 AP2S1P53680 142 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 OR12D2P58182 307 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 ST3GAL3Q11203 375 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 DEFB134Q4QY38 66 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF836Q6ZNA1 936 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 PRSS41Q7RTY9 318 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 THAP4Q8WY91 577 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 TSACCQ96A04 125 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 CREB3L1Q96BA8 519 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 SLC41A3Q96GZ6 507 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 RBP7Q96R05 134 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 DDOQ99489 341 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 MCHR1Q99705 422 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 MED18Q9BUE0 208 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 ALG8Q9BVK2 526 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 KCNE5Q9UJ90 142 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 SLC7A7Q9UM01 511 aa11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 YBX2Q9Y2T7 364 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 AK6Q9Y3D8 172 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-208ENST00000539506 A0A1W2PQF6 199 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms