RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 MBTPS2O43462 519 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 ZNF3P17036 446 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 SRSF5Q13243 272 aaKnown RBP16.51■□□□□ 0.23
GNE-204ENST00000539208 B3GLCTQ6Y288 498 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 IL17RDQ8NFM7 739 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 NEIL3Q8TAT5 605 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 LMX1AQ8TE12 382 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 DIRAS2Q96HU8 199 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 TNFRSF13CQ96RJ3 184 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 PELOQ9BRX2 385 aaKnown RBP16.51■□□□□ 0.23
GNE-204ENST00000539208 PHF7Q9BWX1 381 aaPredicted RBP16.51■□□□□ 0.23
GNE-204ENST00000539208 TPSD1Q9BZJ3 242 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 OR10A5Q9H207 317 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 MCCC2Q9HCC0 563 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 SERTAD3Q9UJW9 196 aa16.51■□□□□ 0.23
GNE-204ENST00000539208 ZC3H12DA2A288 527 aaKnown RBP16.5■□□□□ 0.23
GNE-204ENST00000539208 FITM1A5D6W6 292 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 H0YIG0 161 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 RNF13O43567 381 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 CDC123O75794 336 aaPredicted RBP16.5■□□□□ 0.23
GNE-204ENST00000539208 NGFRP08138 427 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 CAPZA2P47755 286 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 SCN1BQ07699 218 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 SELENBP1Q13228 472 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 SMAD4Q13485 552 aaKnown RBP16.5■□□□□ 0.23
GNE-204ENST00000539208 TDGQ13569 410 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 ERV3-1Q14264 604 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 GAS6Q14393 721 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.5■□□□□ 0.23
GNE-204ENST00000539208 ARHGAP11AQ6P4F7 1023 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 TMEM91Q6ZNR0 172 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 ZNF615Q8N8J6 731 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 C16orf52Q8NHV5 167 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 PCED1AQ9H1Q7 454 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 SYNDIG1Q9H7V2 258 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 MLLT3P42568 568 aaPredicted RBP16.5■□□□□ 0.23
GNE-204ENST00000539208 FNTBP49356 437 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 GPR143P51810 404 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 SERTAD2Q14140 314 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 KLHL12Q53G59 568 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 GPALPP1Q8IXQ4 340 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 BCORP1Q8N888 145 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 OIT3Q8WWZ8 545 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 ARSGQ96EG1 525 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 MMABQ96EY8 250 aaPredicted RBP16.5■□□□□ 0.23
GNE-204ENST00000539208 AHCYL2Q96HN2 611 aaKnown RBP16.5■□□□□ 0.23
GNE-204ENST00000539208 RAB33BQ9H082 229 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 KCNN2Q9H2S1 579 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 TRIM36Q9NQ86 728 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 SACM1LQ9NTJ5 587 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 RPS6KB2Q9UBS0 482 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 EPHA6Q9UF33 1036 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 GRIP1Q9Y3R0 1128 aa16.5■□□□□ 0.23
GNE-204ENST00000539208 TLCD2A6NGC4 264 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 SERINC4A6NH21 518 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 GTPBP1O00178 669 aaKnown RBP16.49■□□□□ 0.23
GNE-204ENST00000539208 POLR1CO15160 346 aaPredicted RBP16.49■□□□□ 0.23
GNE-204ENST00000539208 RGS9O75916 674 aaPredicted RBP16.49■□□□□ 0.23
GNE-204ENST00000539208 PPP1R3DO95685 299 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 IFNGP01579 166 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 SBK2P0C263 348 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 IL9P15248 144 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 MAOAP21397 527 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 PTBP1P26599 531 aaKnown RBP eCLIP16.49■□□□□ 0.23
GNE-204ENST00000539208 POU4F2Q12837 409 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 METAP1DQ6UB28 335 aaPredicted RBP16.49■□□□□ 0.23
GNE-204ENST00000539208 KIRREL2Q6UWL6 708 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 AKAP14Q86UN6 197 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 GATAD2AQ86YP4 633 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 CAMKK1Q8N5S9 505 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 OR51Q1Q8NH59 317 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 ATF6BQ99941 703 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 SOSTQ9BQB4 213 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 PDE7BQ9NP56 450 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 TIGARQ9NQ88 270 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 NPAP1Q9NZP6 1156 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 PRODH2Q9UF12 536 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 ICAM5Q9UMF0 924 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 ERVK-19Q9WJR5 959 aa16.49■□□□□ 0.23
GNE-204ENST00000539208 MT-ND5P03915 603 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 RACK1P63244 317 aaKnown RBP16.48■□□□□ 0.23
GNE-204ENST00000539208 CRYZQ08257 329 aaKnown RBP16.48■□□□□ 0.23
GNE-204ENST00000539208 ASAH1Q13510 395 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 CRMP1Q14194 572 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 TRAM1Q15629 374 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 OGFOD3Q6PK18 319 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 NRARPQ7Z6K4 114 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 SDR16C5Q8N3Y7 309 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 CADM4Q8NFZ8 388 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 OR51V1Q9H2C8 321 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 ADGRL4Q9HBW9 690 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 MKKSQ9NPJ1 570 aaPredicted RBP16.48■□□□□ 0.23
GNE-204ENST00000539208 LRIT1Q9P2V4 623 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 A0A1W2PQ09 198 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 REM1O75628 298 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 NOS3P29474 1203 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 RFX2P48378 723 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 TAS2R43P59537 309 aa16.48■□□□□ 0.23
GNE-204ENST00000539208 RPS7P62081 194 aaKnown RBP16.48■□□□□ 0.23
GNE-204ENST00000539208 ACTC1P68032 377 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms