RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 GCAP28676 217 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 FRKP42685 505 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 GZMKP49863 264 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 EFNA4P52798 201 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 QPRTQ15274 297 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 C3orf33Q6P1S2 294 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 ZCCHC12Q6PEW1 402 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 TIFABQ6ZNK6 161 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 FRMD7Q6ZUT3 714 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 LCA5Q86VQ0 697 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 DEPDC4Q8N2C3 294 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 PROX1Q92786 737 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 ZNF764Q96H86 408 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 INPP5KQ9BT40 448 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 TSPYL1Q9H0U9 437 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 PIGUQ9H490 435 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 EML4Q9HC35 981 aaKnown RBP12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 DUSP22Q9NRW4 184 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 ACSS1Q9NUB1 689 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 C1orf109Q9NX04 203 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 TRAF6Q9Y4K3 522 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 SLC25A15Q9Y619 301 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 ATP23Q9Y6H3 246 aa12.32□□□□□ -0.44
SMARCA4-206ENST00000538456 NPIPB8E9PQR5 432 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 URI1O94763 535 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 CSF3P09919 207 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 MYL2P10916 166 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 HNF1AP20823 631 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 DIO1P49895 249 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 RPL38P63173 70 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 TP53BP2Q13625 1128 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 PDE7AQ13946 482 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 CARTPTQ16568 116 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 TIGD2Q4W5G0 525 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 CFAP157Q5JU67 520 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 EXOSC6Q5RKV6 272 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 DCST2Q5T1A1 773 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 FBXW9Q5XUX1 488 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 ZYG11AQ6WRX3 759 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 TOR1AIP2Q8NFQ8 470 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 OR2T11Q8NH01 316 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 APH1AQ96BI3 265 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 MSI2Q96DH6 328 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 DNAJA3Q96EY1 480 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 STACQ99469 402 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 HOXD1Q9GZZ0 328 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 SIRT3Q9NTG7 399 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 EMCNQ9ULC0 261 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 NOSIPQ9Y314 301 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 FIS1Q9Y3D6 152 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 KCNE3Q9Y6H6 103 aa12.31□□□□□ -0.44
SMARCA4-206ENST00000538456 G3V2L1 256 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 SULT2B1O00204 365 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 ZNF264O43296 627 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 KIAA0513O60268 411 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 TBX19O60806 448 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 CYP7B1O75881 506 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 UROSP10746 265 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 UBL4AP11441 157 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 BMP4P12644 408 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 PRPH2P23942 346 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 ECHS1P30084 290 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 CHRNB3Q05901 458 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 CKAP4Q07065 602 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 CBFBQ13951 182 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 SLC25A53Q5H9E4 307 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 ABLIM2Q6H8Q1 611 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 OR5W2Q8NH69 310 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 ADAMTS15Q8TE58 950 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 CCDC126Q96EE4 140 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 METTL2AQ96IZ6 378 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 ASB6Q9NWX5 421 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 EMC3Q9P0I2 261 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 DTNAQ9Y4J8 743 aa12.3□□□□□ -0.44
SMARCA4-206ENST00000538456 SLC28A1O00337 649 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 APEHP13798 732 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 PDLIM4P50479 330 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 ATP12AP54707 1039 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 FOXG1P55316 489 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 SPDYE7PQ495Y7 208 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 GALNTL6Q49A17 601 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 RFTN2Q52LD8 501 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 C9orf135Q5VTT2 229 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 ARL8AQ96BM9 186 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 FCRL1Q96LA6 429 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 PIMREGQ9BSJ6 248 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 TRMOQ9BU70 441 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 THUMPD3Q9BV44 507 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 PRR14Q9BWN1 585 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 ACTRT3Q9BYD9 372 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 TAS2R16Q9NYV7 291 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 FAF1Q9UNN5 650 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 PMF1-BGLAPU3KQ54 211 aa12.29□□□□□ -0.44
SMARCA4-206ENST00000538456 IGHV4-61A0A0C4DH41 118 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 VWC2LB2RUY7 222 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 ATP6V1G2-DDX39BF2Z307 99 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 NPIPB9F8W1W9 429 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 H3BQF6 201 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 EIF4E2O60573 245 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms