RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 STX18Q9P2W9 335 aaKnown RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 C19orf53Q9UNZ5 99 aaPredicted RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 PCDHGA6Q9Y5G7 932 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 KCNE1BA0A087WTH5 132 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 A0A096LPI6 279 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 LRRTM2O43300 516 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 OXSR1O95747 527 aaPredicted RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 COX6A1P12074 109 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 PPICP45877 212 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 CLDN17P56750 224 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 CLDN20P56880 219 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 CTXN1P60606 82 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 ZNF169Q14929 603 aaPredicted RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 GGTA1PQ4G0N0 100 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 HMBOX1Q6NT76 420 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 RPTNQ6XPR3 784 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 MRGPRGQ86SM5 289 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 CCDC120Q96HB5 630 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 OIP5O43482 229 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 KLK8O60259 260 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 SUSD5O60279 629 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 FCER2P06734 321 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 UQCRFS1P47985 274 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 MS4A2Q01362 244 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 ZNF630Q2M218 657 aaPredicted RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 MPEG1Q2M385 716 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 PRICKLE4Q2TBC4 344 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 QSOX2Q6ZRP7 698 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 KLHDC8BQ8IXV7 354 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 PGAM4Q8N0Y7 254 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 CNPY4Q8N129 248 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 BMPERQ8N8U9 685 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 PROKR2Q8NFJ6 384 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 TEX47Q8TBZ9 253 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 NT5CQ8TCD5 201 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 THEM6Q8WUY1 208 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 TSSK6Q9BXA6 273 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 ASPNQ9BXN1 380 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 PIGUQ9H490 435 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 ZFP64Q9NPA5 681 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 LANCL2Q9NS86 450 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 RIMS3Q9UJD0 308 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 SAMD4AQ9UPU9 718 aaKnown RBP6.61□□□□□ -1.35
MSH6-209ENST00000538136 GRIP1Q9Y3R0 1128 aa6.61□□□□□ -1.35
MSH6-209ENST00000538136 IGHV1-45A0A0A0MS14 117 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TCRBV16S1A1N1A0A5B0 115 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 FIGNL2A6NMB9 653 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 KDM4EB2RXH2 506 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 RNASET2O00584 256 aaKnown RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 TRIM3O75382 744 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 SP1P08047 785 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 SNU13P55769 128 aaKnown RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 UBE2NP61088 152 aaKnown RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 PSG6Q00889 435 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TRIM25Q14258 630 aaKnown RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 PDSS1Q5T2R2 415 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 C10orf62Q5T681 223 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 PLAG1Q6DJT9 500 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 Q6ZPB1 254 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 C10orf111Q8N326 155 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 GPR137CQ8N3F9 429 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 LRRC17Q8N6Y2 441 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TMEM99Q8N816 258 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 HMGCLL1Q8TB92 370 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 PIGXQ8TBF5 258 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 FAM81AQ8TBF8 368 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ISL2Q96A47 359 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ARL5BQ96KC2 179 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ALPK1Q96QP1 1244 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 VRK1Q99986 396 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TIGARQ9NQ88 270 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 SLC25A37Q9NYZ2 338 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 FZR1Q9UM11 496 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ZNF337Q9Y3M9 751 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 HMGN4O00479 90 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 PPM1BO75688 479 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 WISP2O76076 250 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 AQP2P41181 271 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 SLC37A1P57057 533 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 LSM11P83369 360 aaKnown RBP eCLIP6.6□□□□□ -1.35
MSH6-209ENST00000538136 HSF2Q03933 536 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 PCOLCEQ15113 449 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 FBXW8Q8N3Y1 598 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TMEM251Q8N6I4 163 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ZNF555Q8NEP9 628 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 FLVCR1-AS1Q8TAF5 88 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ABHD3Q8WU67 409 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 SGCZQ96LD1 299 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 UCN2Q96RP3 112 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 MKS1Q9NXB0 559 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 LIPT1Q9Y234 373 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 IGSF10Q6WRI0 2623 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TMED7-TICAM2A0A0A6YYA0 188 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 A0A1B0GWA3 101 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ENO4A6NNW6 628 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 F5H5K5 113 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TBX1O43435 398 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 FMO6PO60774 539 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TBX6O95947 436 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms